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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 3
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plastid 1
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:plasma membrane
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_12s0034g00250.t01 Wine grape cytosol, extracellular, plastid 48.21 45.38
TraesCS6B01G398000.1 Wheat extracellular 51.79 45.31
VIT_18s0001g06480.t01 Wine grape cytosol, extracellular, vacuole 51.79 41.13
KRG97766 Soybean endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 47.32 39.55
GSMUA_AchrUn_... Banana extracellular 57.14 33.68
GSMUA_Achr5P12400_001 Banana extracellular 55.36 32.63
PGSC0003DMT400053882 Potato extracellular 49.11 28.06
Os04t0559700-01 Rice plasma membrane 61.61 23.96
PGSC0003DMT400009240 Potato cytosol, extracellular, plasma membrane 53.57 23.9
EES07484 Sorghum plasma membrane 61.61 23.88
Zm00001d017526_P001 Maize plasma membrane 61.61 23.88
Os02t0666200-01 Rice plasma membrane 61.61 23.88
PGSC0003DMT400000151 Potato cytosol, peroxisome, plasma membrane 60.71 23.86
Zm00001d051403_P001 Maize plasma membrane 61.61 23.63
Zm00001d051872_P001 Maize plasma membrane 60.71 23.61
Zm00001d002690_P001 Maize plasma membrane 60.71 23.61
EES11257 Sorghum cytosol, peroxisome, plasma membrane 60.71 23.61
PGSC0003DMT400032134 Potato cytosol, peroxisome, plasma membrane 59.82 23.43
HORVU6Hr1G064140.1 Barley golgi, peroxisome, plasma membrane 59.82 23.1
OQU85985 Sorghum cytosol, peroxisome, plasma membrane 59.82 23.1
TraesCS6A01G245100.1 Wheat golgi, peroxisome, plasma membrane 59.82 23.1
PGSC0003DMT400014809 Potato peroxisome 58.93 23.0
PGSC0003DMT400012780 Potato cytosol, peroxisome, plasma membrane 58.93 22.92
PGSC0003DMT400060322 Potato mitochondrion 56.25 22.91
PGSC0003DMT400053479 Potato plasma membrane 58.04 22.73
PGSC0003DMT400062174 Potato plasma membrane 56.25 22.03
PGSC0003DMT400027154 Potato plasma membrane 53.57 21.35
TraesCS2D01G404800.2 Wheat golgi, peroxisome, plasma membrane 59.82 21.34
PGSC0003DMT400015824 Potato plasma membrane 53.57 21.2
PGSC0003DMT400053877 Potato plasma membrane 52.68 21.15
PGSC0003DMT400020870 Potato plasma membrane 53.57 20.91
PGSC0003DMT400068708 Potato plasma membrane 52.68 20.85
PGSC0003DMT400053881 Potato plasma membrane 53.57 19.54
Bra039301.1-P Field mustard cytosol, peroxisome, plasma membrane 44.64 17.86
PGSC0003DMT400069330 Potato cytosol 29.46 12.74
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 27.68 12.4
PGSC0003DMT400006558 Potato endoplasmic reticulum, plasma membrane 26.79 12.05
PGSC0003DMT400068047 Potato cytosol, extracellular, plastid, vacuole 25.89 11.69
PGSC0003DMT400042613 Potato cytosol, extracellular, plasma membrane 25.89 11.65
PGSC0003DMT400077927 Potato cytosol, plasma membrane, plastid, vacuole 25.89 11.46
PGSC0003DMT400072432 Potato cytosol 25.0 11.29
PGSC0003DMT400038394 Potato plastid 25.0 11.16
PGSC0003DMT400039507 Potato cytosol, golgi, plasma membrane 25.89 11.15
PGSC0003DMT400018375 Potato cytosol 23.21 10.4
PGSC0003DMT400024847 Potato extracellular, plasma membrane, vacuole 21.43 9.72
Protein Annotations
Gene3D:1.20.1080.10MapMan:35.1InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:IPR023271UniProt:M1CBK5InterPro:MIPPFAM:PF00230EnsemblPlantsGene:PGSC0003DMG400024879
PGSC:PGSC0003DMG400024879EnsemblPlants:PGSC0003DMT400064008PRINTS:PR00783PANTHER:PTHR19139PANTHER:PTHR19139:SF190SUPFAM:SSF81338
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000295E301:::
Description
Water channel protein [Source:PGSC_GENE;Acc:PGSC0003DMG400024879]
Coordinates
chr1:+:80015152..80022476
Molecular Weight (calculated)
12380.4 Da
IEP (calculated)
9.829
GRAVY (calculated)
0.514
Length
112 amino acids
Sequence
(BLAST)
001: MPRYALWCWC CQRVLTIFFK IKGGCANVVS HDYTKGDEIV GTSILVYTVF SATVAQRNAR HSHVLILAPL PIGFAVFLVH LATIPIKYTG INPARSVGAA
101: IVYNGKHAWM TM
Best Arabidopsis Sequence Match ( AT4G23400.1 )
(BLAST)
001: MEGKEEDVNV GANKFPERQP IGTAAQTESK DYKEPPPAPF FEPGELKSWS FYRAGIAEFI ATFLFLYVTV LTVMGVKRAP NMCASVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRALFYIVMQ CLGAICGAGV VKGFQPGLYQ TNGGGANVVA HGYTKGSGLG AEIVGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HAWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKT
Arabidopsis Description
PIP1-5PIP1D [Source:UniProtKB/TrEMBL;Acc:A0A178V129]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.