Factsheet for Bra039301.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	87.86	86.01
Bra014437.1-P	Field mustard	plasma membrane	86.43	84.62
Bra032644.1-P	Field mustard	plasma membrane	85.71	83.92
Bra007603.1-P	Field mustard	plasma membrane	85.71	83.92
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	85.0	83.22
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	85.36	82.99
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	82.14	80.14
EES07484	Sorghum	plasma membrane	78.21	75.78
Zm00001d017526_P001	Maize	plasma membrane	78.21	75.78
Zm00001d002690_P001	Maize	plasma membrane	77.5	75.35
Zm00001d051403_P001	Maize	plasma membrane	78.57	75.34
TraesCS6B01G279200.1	Wheat	plastid	77.86	75.17
Os02t0666200-01	Rice	plasma membrane	77.5	75.09
EES11257	Sorghum	cytosol, peroxisome, plasma membrane	76.79	74.65
TraesCS6A01G245100.1	Wheat	golgi, peroxisome, plasma membrane	77.14	74.48
HORVU6Hr1G064140.1	Barley	golgi, peroxisome, plasma membrane	77.14	74.48
TraesCS6D01G227500.1	Wheat	golgi	76.79	74.14
Zm00001d051872_P001	Maize	plasma membrane	74.64	72.57
OQU85985	Sorghum	cytosol, peroxisome, plasma membrane	73.93	71.38
KRG97766	Soybean	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	29.29	61.19
Bra011585.1-P	Field mustard	plasma membrane	60.0	59.79
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.29	59.07
Bra003196.1-P	Field mustard	plasma membrane	60.0	58.74
Bra007100.1-P	Field mustard	plasma membrane	60.0	58.74
Bra017697.1-P	Field mustard	cytosol	58.93	58.72
Bra006997.1-P	Field mustard	plasma membrane	59.64	58.19
Bra020238.1-P	Field mustard	plasma membrane	58.57	57.95
Bra006650.1-P	Field mustard	plasma membrane	58.57	57.54
Bra023102.1-P	Field mustard	plasma membrane	57.86	57.24
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	47.14	57.14
Bra002462.1-P	Field mustard	cytosol	52.86	56.92
Bra023103.1-P	Field mustard	plasma membrane	57.5	56.49
Bra000111.1-P	Field mustard	plasma membrane	57.86	56.25
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.29	52.1
VIT_18s0001g06480.t01	Wine grape	cytosol, extracellular, vacuole	23.21	46.1
PGSC0003DMT400064008	Potato	extracellular	17.86	44.64
VIT_12s0034g00250.t01	Wine grape	cytosol, extracellular, plastid	15.71	36.97
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	28.21	31.85
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	28.21	31.73
Bra037415.1-P	Field mustard	cytosol	27.86	30.95
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	27.14	30.52
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	22.5	30.0
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	26.43	29.6
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	28.21	29.59
Bra022131.1-P	Field mustard	extracellular	21.43	29.41
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	27.86	29.32
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	25.71	28.69
Bra017222.1-P	Field mustard	cytosol	25.71	28.69
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	27.14	28.46
Bra016014.1-P	Field mustard	cytosol	26.79	28.3
Bra032937.1-P	Field mustard	plasma membrane	25.36	28.06
Bra025210.1-P	Field mustard	plasma membrane	25.36	28.06
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	25.0	27.45

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra039301	EnsemblPlants:Bra039301.1
EnsemblPlants:Bra039301.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4FDY0
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF202	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI000254445C	SEG:seg

Description

AT2G45960 (E=2e-138) PIP1B, TMP-A, ATHH2, PIP1;2 | PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B); water channel

Coordinates

chrA04:+:18687476..18688924

Molecular Weight (calculated)

30149.1 Da

IEP (calculated)

8.882

GRAVY (calculated)

0.445

Length

280 amino acids

Sequence
(BLAST)

001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPLF EPGELGSWSF WRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVYYIVMQC LGAICGAGVV KGFQPKQYQA LGGGANTVAP VTPKEVVLEL RLLEPLSLFT PSFPPLTPRE
201: TLILAPLPIG FAVFLVHLAT IPITGTGINP ARSLGAAIIF NKDNAWDDHW VFWVGPFIGA ALAALYHVIV IRAIPFKSRS

Best Arabidopsis Sequence Match ( AT1G01620.1 )
(BLAST)

001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS

Arabidopsis Description

PIP1-3TMP-B [Source:UniProtKB/TrEMBL;Acc:A0A178WIA6]
SUBAcon: [golgi,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.