Factsheet for Bra004950.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74777	Canola	cytosol, peroxisome, plasma membrane	98.6	98.6
CDY37078	Canola	cytosol, peroxisome, plasma membrane	98.25	98.25
CDY27346	Canola	cytosol, peroxisome, plasma membrane	98.25	98.25
CDX83385	Canola	cytosol, peroxisome, plasma membrane	98.25	98.25
CDX95670	Canola	cytosol, peroxisome, plasma membrane	97.55	97.55
Bra014437.1-P	Field mustard	plasma membrane	95.8	95.8
Bra007603.1-P	Field mustard	plasma membrane	95.1	95.1
Bra032644.1-P	Field mustard	plasma membrane	94.06	94.06
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	93.01	93.01
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	93.36	92.71
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	90.21	89.9
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	86.01	87.86
VIT_13s0067g00220.t01	Wine grape	plasma membrane	87.76	87.76
KRH59918	Soybean	peroxisome	86.36	86.06
Solyc08g008050.2.1	Tomato	peroxisome	86.01	85.71
PGSC0003DMT400014809	Potato	peroxisome	86.01	85.71
Solyc01g094690.2.1	Tomato	nucleus	85.31	85.61
PGSC0003DMT400000151	Potato	cytosol, peroxisome, plasma membrane	85.31	85.61
KRH66037	Soybean	golgi, peroxisome, plasma membrane	84.97	85.56
KRH77555	Soybean	plasma membrane	85.31	85.31
KRH41192	Soybean	endoplasmic reticulum	86.01	85.12
AT2G45960.3	Thale cress	golgi, peroxisome, plasma membrane	89.51	85.05
KRH27918	Soybean	plasma membrane	84.97	84.97
PGSC0003DMT400012780	Potato	cytosol, peroxisome, plasma membrane	85.31	84.72
Solyc12g056220.1.1	Tomato	plastid	85.31	84.72
PGSC0003DMT400032134	Potato	cytosol, peroxisome, plasma membrane	84.27	84.27
Solyc08g081190.2.1	Tomato	plastid	83.92	83.92
PGSC0003DMT400053479	Potato	plasma membrane	83.57	83.57
Solyc03g096290.2.1	Tomato	nucleus	82.87	82.87
KRH00178	Soybean	golgi, peroxisome, plasma membrane	82.52	82.23
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	56.29	69.7
Bra011585.1-P	Field mustard	plasma membrane	67.13	68.33
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.43	67.62
Bra017697.1-P	Field mustard	cytosol	65.73	66.9
Bra023102.1-P	Field mustard	plasma membrane	66.08	66.78
Bra007100.1-P	Field mustard	plasma membrane	66.78	66.78
Bra003196.1-P	Field mustard	plasma membrane	66.78	66.78
Bra006997.1-P	Field mustard	plasma membrane	66.78	66.55
Bra002462.1-P	Field mustard	cytosol	60.49	66.54
TraesCS2A01G407700.2	Wheat	golgi, peroxisome, plasma membrane	67.13	66.44
Bra023103.1-P	Field mustard	plasma membrane	65.73	65.96
Bra006650.1-P	Field mustard	plasma membrane	65.73	65.96
Bra020238.1-P	Field mustard	plasma membrane	65.03	65.72
KRH75838	Soybean	golgi, peroxisome, plasma membrane	82.17	64.74
Bra000111.1-P	Field mustard	plasma membrane	65.03	64.58
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.8	63.45
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	31.47	36.29
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.47	36.14
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	26.22	35.71
Bra037415.1-P	Field mustard	cytosol	30.42	34.52
Bra022131.1-P	Field mustard	extracellular	24.48	34.31
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	31.47	33.83
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	31.47	33.71
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	29.02	33.33
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	29.02	33.2
Bra016014.1-P	Field mustard	cytosol	30.42	32.83
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	28.67	32.67
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	30.42	32.58
Bra017222.1-P	Field mustard	cytosol	28.32	32.27
Bra032937.1-P	Field mustard	plasma membrane	28.32	32.02
Bra025210.1-P	Field mustard	plasma membrane	27.97	31.62
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	25.52	28.63

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra004950	EnsemblPlants:Bra004950.1
EnsemblPlants:Bra004950.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005886	GO:GO:0006810	GO:GO:0006833	GO:GO:0006950
GO:GO:0008150	GO:GO:0009414	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009651
GO:GO:0015250	GO:GO:0015267	GO:GO:0015670	GO:GO:0016020	GO:GO:0016021	GO:GO:0046658
GO:GO:0055085	InterPro:IPR023271	UniProt:M4CL64	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF202	SUPFAM:SSF81338	TIGRFAMs:TIGR00861
TMHMM:TMhelix	UniParc:UPI00025480D8	:	:	:	:

Description

AT2G45960 (E=1e-161) PIP1B, TMP-A, ATHH2, PIP1;2 | PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B); water channel

Coordinates

chrA05:+:2615972..2617343

Molecular Weight (calculated)

30266.0 Da

IEP (calculated)

9.166

GRAVY (calculated)

0.421

Length

286 amino acids

Sequence
(BLAST)

001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD CKEPPPAPLF EPGELASWSF GRAGIAEFIA AFLFLYITVL TVMGVKRSPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVYYIVMQC LGAICGAGVV KGFQPKQYQA LGGGANTVAP GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: NARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIISNKDN AWDDHWVFWV GPFIGAALAA LYHVIVIRAI PFKSRS

Best Arabidopsis Sequence Match ( AT2G45960.1 )
(BLAST)

001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPLF EPGELASWSF WRAGIAEFIA TFLFLYITVL TVMGVKRSPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVYYIVMQC LGAICGAGVV KGFQPKQYQA LGGGANTIAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: NARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIFNKDN AWDDHWVFWV GPFIGAALAA LYHVIVIRAI PFKSRS

Arabidopsis Description

PIP1BPlasma membrane intrinsic protein 1B [Source:UniProtKB/TrEMBL;Acc:A8MRW1]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.