Factsheet for Bra034271.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
vacuole 4
cytosol 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra020182.1-P
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25810.1	Bra030034.1-P	AT1G27300.1	21798944
AT2G25810.1	Bra032817.1-P	AT1G27300.1	21798944
AT2G25810.1	Bra002403.1-P	AT5G22290.1	21798944
AT2G25810.1	Bra006619.1-P	AT5G22290.1	21798944
AT2G25810.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77009	Canola	cytosol, plasma membrane, vacuole	98.8	98.8
CDY35336	Canola	extracellular	54.22	94.41
AT2G25810.1	Thale cress	cytosol, golgi, plasma membrane	93.17	93.17
KRH52727	Soybean	cytosol	75.9	76.83
KRH62059	Soybean	cytosol, plasma membrane, vacuole	75.9	76.83
PGSC0003DMT400024847	Potato	extracellular, plasma membrane, vacuole	75.1	75.71
Solyc08g066840.2.1	Tomato	endoplasmic reticulum, plasma membrane	74.3	74.9
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	67.07	67.07
TraesCS3D01G163400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	59.44	60.16
TraesCS3A01G434600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	56.63	59.49
Os01t0232000-00	Rice	cytosol, endoplasmic reticulum, plasma membrane	59.84	59.36
EES02191	Sorghum	cytosol	59.84	59.13
TraesCS3B01G182200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	58.63	58.17
Zm00001d015518_P001	Maize	endoplasmic reticulum, extracellular	24.1	56.6
Zm00001d019676_P001	Maize	endoplasmic reticulum, extracellular, plastid	23.69	55.66
VIT_04s0008g03550.t01	Wine grape	plasma membrane	67.07	55.48
Zm00001d039713_P001	Maize	plasma membrane	55.42	55.42
TraesCS3A01G155800.1	Wheat	plasma membrane	55.02	55.24
TraesCS3B01G182400.1	Wheat	plasma membrane	55.02	55.24
Zm00001d037779_P001	Maize	cytosol, plasma membrane, vacuole	55.02	53.73
TraesCS5A01G518300.1	Wheat	golgi, plasma membrane, vacuole	55.02	53.52
TraesCS4D01G344300.1	Wheat	plasma membrane	54.62	53.33
TraesCS4B01G349500.1	Wheat	plasma membrane	54.62	53.33
Zm00001d020747_P001	Maize	extracellular	22.89	53.27
KXG31483	Sorghum	extracellular, golgi, plasma membrane	53.82	52.96
Bra022131.1-P	Field mustard	extracellular	43.37	52.94
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.58	52.86
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	53.01	52.8
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	52.61	52.61
Bra017222.1-P	Field mustard	cytosol	52.61	52.19
Zm00001d039293_P001	Maize	plastid	59.84	51.92
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	51.41	51.61
Bra032937.1-P	Field mustard	plasma membrane	51.81	50.99
Bra025210.1-P	Field mustard	plasma membrane	51.81	50.99
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	51.81	50.59
Os01t0232100-01	Rice	cytosol, endoplasmic reticulum, extracellular	51.81	50.39
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	49.8	49.4
GSMUA_Achr1P13800_001	Banana	cytosol	50.2	49.21
Bra016014.1-P	Field mustard	cytosol	51.81	48.68
Bra037415.1-P	Field mustard	cytosol	49.0	48.41
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	51.41	48.12
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	49.4	46.07
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	48.59	45.32
HORVU4Hr1G085250.2	Barley	plastid	54.62	45.18
Os05t0231700-01	Rice	golgi, mitochondrion, plasma membrane	55.82	44.27
EES17913	Sorghum	cytosol, plastid	54.62	43.31
Zm00001d010410_P001	Maize	plasma membrane, plastid	53.41	42.77
HORVU3Hr1G031620.5	Barley	nucleus, peroxisome, plastid	53.41	41.82
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	36.14	35.29
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	30.52	32.9
HORVU3Hr1G031680.1	Barley	vacuole	34.14	31.72
Bra011585.1-P	Field mustard	plasma membrane	34.94	30.96
Bra006997.1-P	Field mustard	plasma membrane	35.34	30.66
Bra017697.1-P	Field mustard	cytosol	34.54	30.61
Bra023102.1-P	Field mustard	plasma membrane	34.54	30.39
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.14	30.25
Bra023103.1-P	Field mustard	plasma membrane	34.54	30.18
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.14	29.72
Bra002462.1-P	Field mustard	cytosol	30.92	29.62
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.14	29.51
Bra006650.1-P	Field mustard	plasma membrane	33.73	29.47
Bra014437.1-P	Field mustard	plasma membrane	33.73	29.37
Bra032644.1-P	Field mustard	plasma membrane	33.73	29.37
Bra020238.1-P	Field mustard	plasma membrane	33.33	29.33
Bra007603.1-P	Field mustard	plasma membrane	33.33	29.02
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.33	29.02
Bra003196.1-P	Field mustard	plasma membrane	33.33	29.02
Bra007100.1-P	Field mustard	plasma membrane	32.93	28.67
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.13	27.87
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.51	27.73
Bra000111.1-P	Field mustard	plasma membrane	31.73	27.43
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.52	27.14

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra034271	EnsemblPlants:Bra034271.1
EnsemblPlants:Bra034271.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0008150	GO:GO:0009705	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0042807	GO:GO:0055085	InterPro:IPR023271	UniProt:M4EZM8
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF186	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00025450D9	SEG:seg

Description

AT2G25810 (E=8e-105) TIP4;1 | TIP4;1 (tonoplast intrinsic protein 4;1); water channel

Coordinates

chrA04:+:11555154..11556836

Molecular Weight (calculated)

26092.8 Da

IEP (calculated)

5.431

GRAVY (calculated)

0.709

Length

249 amino acids

Sequence
(BLAST)

001: MKKIDLGNHR EAAQPDCIKA LIVEFITTFF FVFAGVGSAM ATDSLVGNTL VGLLAVAVAH ALVVAVMISA GHISGGHLNP AVTIGLLFGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGISYTQGII WEIILTFSLL FTVYATMVDP KKGSLDGLGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRSDAPL ADDEQPFLN

Best Arabidopsis Sequence Match ( AT2G25810.1 )
(BLAST)

001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN

Arabidopsis Description

TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.