Factsheet for Zm00001d039713_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
golgi 1
plasma membrane 3
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d016570_P001
Zm00001d050563_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25810.1	Zm00001d016570_P001	AT1G27300.1	21798944
AT2G25810.1	Zm00001d050563_P001	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31483	Sorghum	extracellular, golgi, plasma membrane	92.37	90.91
TraesCS3B01G182400.1	Wheat	plasma membrane	69.48	69.76
TraesCS3A01G155800.1	Wheat	plasma membrane	69.48	69.76
Os01t0232100-01	Rice	cytosol, endoplasmic reticulum, extracellular	70.68	68.75
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	61.85	61.85
Zm00001d015518_P001	Maize	endoplasmic reticulum, extracellular	25.3	59.43
Zm00001d019676_P001	Maize	endoplasmic reticulum, extracellular, plastid	25.3	59.43
Zm00001d020747_P001	Maize	extracellular	24.5	57.01
AT2G25810.1	Thale cress	cytosol, golgi, plasma membrane	56.63	56.63
KRH62059	Soybean	cytosol, plasma membrane, vacuole	55.42	56.1
KRH52727	Soybean	cytosol	55.02	55.69
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	55.42	55.42
Zm00001d037779_P001	Maize	cytosol, plasma membrane, vacuole	56.63	55.29
CDX77009	Canola	cytosol, plasma membrane, vacuole	55.02	55.02
GSMUA_Achr1P13800_001	Banana	cytosol	55.82	54.72
PGSC0003DMT400024847	Potato	extracellular, plasma membrane, vacuole	54.22	54.66
CDY35336	Canola	extracellular	31.33	54.55
Solyc08g066840.2.1	Tomato	endoplasmic reticulum, plasma membrane	53.82	54.25
Zm00001d039293_P001	Maize	plastid	59.84	51.92
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	51.41	50.2
Zm00001d027652_P001	Maize	plasma membrane	45.78	45.6
Zm00001d051362_P001	Maize	plasma membrane	45.38	45.38
Zm00001d011778_P001	Maize	plasma membrane	46.18	45.28
VIT_04s0008g03550.t01	Wine grape	plasma membrane	54.62	45.18
Zm00001d026177_P001	Maize	extracellular	44.98	45.16
Zm00001d017485_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	44.58	44.4
Zm00001d010410_P001	Maize	plasma membrane, plastid	55.42	44.37
Zm00001d002738_P001	Maize	plasma membrane	44.18	44.35
Zm00001d032610_P003	Maize	mitochondrion, plastid	46.59	43.61
Zm00001d013956_P003	Maize	plasma membrane	45.38	43.13
HORVU3Hr1G031680.1	Barley	vacuole	42.97	39.93
Zm00001d002952_P001	Maize	plasma membrane	38.15	35.85
Zm00001d026178_P002	Maize	plastid	34.54	32.21
Zm00001d048520_P014	Maize	mitochondrion	31.33	29.1
Zm00001d019563_P006	Maize	plasma membrane	30.92	26.55
Zm00001d005421_P001	Maize	plasma membrane	30.52	26.03
Zm00001d005410_P001	Maize	plasma membrane	29.72	25.87
Zm00001d014285_P001	Maize	plasma membrane	29.32	25.8
Zm00001d019565_P001	Maize	plasma membrane	29.72	25.69
Zm00001d017288_P001	Maize	plasma membrane	29.32	25.35
Zm00001d003006_P001	Maize	plasma membrane	28.92	25.26
Zm00001d051174_P002	Maize	plasma membrane	29.32	25.26
Zm00001d002690_P001	Maize	plasma membrane	28.11	24.31
Zm00001d022608_P001	Maize	plasma membrane	28.11	24.31
Zm00001d051403_P001	Maize	plasma membrane	28.11	23.97
Zm00001d051872_P001	Maize	plasma membrane	27.71	23.96
Zm00001d017526_P001	Maize	plasma membrane	27.71	23.88

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:109280157	MapMan:24.3.1.3	UniProt:A0A1D6MKQ5	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	ProteinID:ONM29794.1
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF165	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI000221D29E	EnsemblPlantsGene:Zm00001d039713	EnsemblPlants:Zm00001d039713_P001	EnsemblPlants:Zm00001d039713_T001	SEG:seg

Description

tonoplast intrinsic protein4 tonoplast intrinsic protein4

Coordinates

chr3:+:12824022..12826924

Molecular Weight (calculated)

25172.8 Da

IEP (calculated)

6.950

GRAVY (calculated)

0.798

Length

249 amino acids

Sequence
(BLAST)

001: MGKLTLGHRG EASEPDFFRG VLGELVLTFL FVFIGVGAAM TDGATTKGST AGGDLTAVAL GQALVVAVIA TAGFHISGGH VNPAVTLSLA VGGHVTLFRS
101: SLYIAAQMLG SSAACFLLRW LTGGLATPVH ALAEGVGALQ GVVAEAVFTF SLLFVIYATI LDPRKLLPGA GPLLTGLLVG ANSVAGAALS GASMNPARSF
201: GPAVASGIWT HHWVYWVGPL AGGPLAVLVY ECCFIAAAPT HALLPQQDP

Best Arabidopsis Sequence Match ( AT2G25810.1 )
(BLAST)

001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN

Arabidopsis Description

TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.