Factsheet for Zm00001d020747_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d016570_P001
Zm00001d050563_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25810.1	Zm00001d016570_P001	AT1G27300.1	21798944
AT2G25810.1	Zm00001d050563_P001	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015518_P001	Maize	endoplasmic reticulum, extracellular	82.24	83.02
Zm00001d019676_P001	Maize	endoplasmic reticulum, extracellular, plastid	81.31	82.08
CDY35336	Canola	extracellular	53.27	39.86
Zm00001d037779_P001	Maize	cytosol, plasma membrane, vacuole	79.44	33.33
TraesCS4D01G344300.1	Wheat	plasma membrane	71.03	29.8
TraesCS4B01G349500.1	Wheat	plasma membrane	70.09	29.41
TraesCS5A01G518300.1	Wheat	golgi, plasma membrane, vacuole	70.09	29.3
Zm00001d010410_P001	Maize	plasma membrane, plastid	83.18	28.62
EES17913	Sorghum	cytosol, plastid	79.44	27.07
HORVU4Hr1G085250.2	Barley	plastid	71.03	25.25
Zm00001d039713_P001	Maize	plasma membrane	57.01	24.5
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	57.94	24.31
Os05t0231700-01	Rice	golgi, mitochondrion, plasma membrane	69.16	23.57
CDX77009	Canola	cytosol, plasma membrane, vacuole	54.21	23.29
PGSC0003DMT400024847	Potato	extracellular, plasma membrane, vacuole	53.27	23.08
Solyc08g066840.2.1	Tomato	endoplasmic reticulum, plasma membrane	53.27	23.08
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	53.27	22.89
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	53.27	22.89
AT2G25810.1	Thale cress	cytosol, golgi, plasma membrane	53.27	22.89
GSMUA_Achr1P13800_001	Banana	cytosol	52.34	22.05
KRH52727	Soybean	cytosol	50.47	21.95
KRH62059	Soybean	cytosol, plasma membrane, vacuole	49.53	21.54
Zm00001d039293_P001	Maize	plastid	55.14	20.56
Zm00001d026177_P001	Maize	extracellular	45.79	19.76
Zm00001d051362_P001	Maize	plasma membrane	45.79	19.68
Zm00001d002738_P001	Maize	plasma membrane	44.86	19.35
Zm00001d011778_P001	Maize	plasma membrane	42.99	18.11
VIT_04s0008g03550.t01	Wine grape	plasma membrane	49.53	17.61
Zm00001d017485_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	41.12	17.6
Zm00001d027652_P001	Maize	plasma membrane	40.19	17.2
Zm00001d013956_P003	Maize	plasma membrane	39.25	16.03
Zm00001d002952_P001	Maize	plasma membrane	38.32	15.47
Zm00001d032610_P003	Maize	mitochondrion, plastid	38.32	15.41
Zm00001d026178_P002	Maize	plastid	32.71	13.11
Zm00001d014285_P001	Maize	plasma membrane	29.91	11.31
Zm00001d003006_P001	Maize	plasma membrane	29.91	11.23
Zm00001d019563_P006	Maize	plasma membrane	29.91	11.03
Zm00001d017288_P001	Maize	plasma membrane	28.04	10.42
Zm00001d019565_P001	Maize	plasma membrane	28.04	10.42
Zm00001d051174_P002	Maize	plasma membrane	28.04	10.38
Zm00001d005421_P001	Maize	plasma membrane	28.04	10.27
Zm00001d051872_P001	Maize	plasma membrane	27.1	10.07
Zm00001d002690_P001	Maize	plasma membrane	27.1	10.07
Zm00001d017526_P001	Maize	plasma membrane	27.1	10.03
Zm00001d051403_P001	Maize	plasma membrane	27.1	9.93
Zm00001d005410_P001	Maize	plasma membrane	26.17	9.79
Zm00001d022608_P001	Maize	plasma membrane	25.23	9.38
Zm00001d048520_P014	Maize	mitochondrion	15.89	6.34

Protein Annotations

Gene3D:1.20.1080.10	MapMan:35.1	UniProt:A0A1D6I609	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	ProteinID:ONM55526.1	PFAM:PF00230
PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF143	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000843D8CE
EnsemblPlantsGene:Zm00001d020747	EnsemblPlants:Zm00001d020747_P001	EnsemblPlants:Zm00001d020747_T001	SEG:seg	:	:

Description

Aquaporin TIP4-1

Coordinates

chr7:+:131061325..131061969

Molecular Weight (calculated)

11515.3 Da

IEP (calculated)

12.501

GRAVY (calculated)

0.282

Length

107 amino acids

Sequence
(BLAST)

001: MQVTPVHALG AGINPMQGLV MEVILTFSLL FVTYAMILDP RSQVRTIGPL LTGRIVGANS LASGNFTGAS MNPARSFGPA MATGVWTNHW DRPATRRVPG
101: RLRVRVV

Best Arabidopsis Sequence Match ( AT2G25810.1 )
(BLAST)

001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN

Arabidopsis Description

TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.