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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 extracellular: 20408568
plastid: 22065420
plasma membrane: 23353019
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
msms PMID: 23353019 doi
D Hopff, S Wienkoop, S Lüthje
University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 23508561 doi
Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck
Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d002690_P001
Zm00001d005421_P001
Zm00001d008871_P001
Zm00001d010783_P001
Zm00001d017526_P001
Zm00001d019563_P006
Zm00001d038803_P001
Zm00001d051403_P001
Zm00001d051872_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37180.1 Zm00001d002690_P001 AT1G01620.1 21798944
AT2G37180.1 Zm00001d017526_P001 AT1G01620.1 21798944
AT2G37180.1 Zm00001d051403_P001 AT1G01620.1 21798944
AT2G37180.1 Zm00001d051872_P001 AT1G01620.1 21798944
AT2G37180.1 Zm00001d008871_P001 AT3G16310.1 21798944
AT2G37180.1 Zm00001d010783_P001 AT3G16310.1 21798944
AT2G37180.1 Zm00001d038803_P001 AT3G16310.1 21798944
AT2G37180.1 Zm00001d005421_P001 AT3G54820.1 21798944
AT2G37180.1 Zm00001d019563_P006 AT3G54820.1 21798944
AT2G37180.1 Zm00001d002690_P001 AT3G61430.1 21798944
AT2G37180.1 Zm00001d017526_P001 AT3G61430.1 21798944
AT2G37180.1 Zm00001d051403_P001 AT3G61430.1 21798944
AT2G37180.1 Zm00001d051872_P001 AT3G61430.1 21798944
AT2G37180.1 Zm00001d002690_P001 AT4G23400.1 21798944
AT2G37180.1 Zm00001d017526_P001 AT4G23400.1 21798944
AT2G37180.1 Zm00001d051403_P001 AT4G23400.1 21798944
AT2G37180.1 Zm00001d051872_P001 AT4G23400.1 21798944
AT3G53420.1 Zm00001d005421_P001 AT3G53420.1 19258017
AT3G53420.1 Zm00001d019563_P006 AT3G53420.1 19258017
AT3G54820.1 Zm00001d002690_P001 AT1G01620.1 21798944
AT3G54820.1 Zm00001d017526_P001 AT1G01620.1 21798944
AT3G54820.1 Zm00001d051403_P001 AT1G01620.1 21798944
AT3G54820.1 Zm00001d051872_P001 AT1G01620.1 21798944
AT3G54820.1 Zm00001d002690_P001 AT3G61430.1 21798944
AT3G54820.1 Zm00001d017526_P001 AT3G61430.1 21798944
AT3G54820.1 Zm00001d051403_P001 AT3G61430.1 21798944
AT3G54820.1 Zm00001d051872_P001 AT3G61430.1 21798944
AT3G54820.1 Zm00001d002690_P001 AT4G00430.1 21798944
AT3G54820.1 Zm00001d017526_P001 AT4G00430.1 21798944
AT3G54820.1 Zm00001d051403_P001 AT4G00430.1 21798944
AT3G54820.1 Zm00001d051872_P001 AT4G00430.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d019563_P006 Maize plasma membrane 95.89 96.55
EER98451 Sorghum plasma membrane 95.21 95.86
Os07t0448800-01 Rice plasma membrane 89.04 89.66
TraesCS2B01G225900.1 Wheat golgi 88.7 89.31
TraesCS2A01G198500.1 Wheat plasma membrane 88.7 89.31
TraesCS2D01G206300.1 Wheat golgi 88.36 88.97
KRG91899 Soybean plasma membrane 82.88 85.21
VIT_06s0004g02850.t01 Wine grape plasma membrane 80.82 84.29
PGSC0003DMT400053882 Potato extracellular 56.51 84.18
Zm00001d017288_P001 Maize plasma membrane 82.53 83.68
CDY70391 Canola extracellular, golgi 45.55 83.65
Zm00001d051174_P002 Maize plasma membrane 82.19 83.05
KRH70183 Soybean mitochondrion 80.82 82.81
KRH08523 Soybean plasma membrane 80.48 82.46
KRH08522 Soybean plasma membrane 80.48 82.46
Bra023103.1-P Field mustard plasma membrane 80.14 82.11
Zm00001d003006_P001 Maize plasma membrane 80.14 82.11
VIT_13s0019g04280.t01 Wine grape plasma membrane 79.79 82.04
Bra023102.1-P Field mustard plasma membrane 79.45 81.98
CDY46758 Canola plasma membrane 79.45 81.98
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 64.73 81.82
PGSC0003DMT400053877 Potato plasma membrane 78.08 81.72
KRH70184 Soybean plasma membrane 79.45 81.4
CDY46759 Canola plasma membrane 79.45 81.4
CDX91340 Canola plasma membrane 79.45 81.4
Solyc09g007770.2.1 Tomato nucleus 71.92 81.08
KRH29919 Soybean mitochondrion 79.11 80.77
CDX74983 Canola cytosol, peroxisome, plasma membrane 54.45 80.71
CDX91341 Canola plasma membrane 78.77 80.7
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 65.75 80.67
PGSC0003DMT400027154 Potato plasma membrane 77.4 80.43
Zm00001d005410_P001 Maize plasma membrane 78.77 80.42
KRH25011 Soybean mitochondrion 78.77 80.42
KRH34875 Soybean plasma membrane 81.51 80.41
Solyc10g084120.1.1 Tomato nucleus 77.05 80.07
AT3G54820.1 Thale cress plasma membrane 78.08 79.72
Zm00001d019565_P001 Maize plasma membrane 78.42 79.51
CDX78177 Canola plasma membrane 78.08 79.44
Bra006997.1-P Field mustard plasma membrane 78.08 79.44
VIT_08s0040g01890.t01 Wine grape plasma membrane 77.74 79.09
CDY56697 Canola plasma membrane 77.74 79.09
AT3G53420.1 Thale cress plasma membrane 77.74 79.09
CDX67611 Canola plasma membrane 77.4 79.02
CDY07519 Canola plasma membrane 77.4 79.02
AT2G37180.1 Thale cress plasma membrane 77.05 78.95
CDY13298 Canola plasma membrane 76.71 78.05
Bra007100.1-P Field mustard plasma membrane 76.37 77.97
Bra003196.1-P Field mustard plasma membrane 76.37 77.97
CDX78265 Canola plasma membrane 76.37 77.97
CDX73446 Canola peroxisome 76.03 77.62
KRH26410 Soybean golgi, peroxisome, plasma membrane 75.34 76.66
KRH22889 Soybean golgi, peroxisome, plasma membrane 75.0 76.31
HORVU2Hr1G038740.1 Barley golgi, mitochondrion, plasma membrane 89.04 76.25
KRG95980 Soybean plasma membrane 73.63 75.44
Zm00001d014285_P001 Maize plasma membrane 72.95 75.27
CDX74984 Canola cytosol, peroxisome, plasma membrane 79.45 74.84
KRH67688 Soybean plasma membrane 73.29 74.83
PGSC0003DMT400053881 Potato plasma membrane 77.4 73.62
Solyc09g007760.2.1 Tomato extracellular 76.37 72.88
AT2G37170.2 Thale cress plasma membrane 78.77 70.12
Zm00001d022608_P001 Maize plasma membrane 67.81 68.75
Zm00001d051872_P001 Maize plasma membrane 64.38 65.28
Zm00001d017526_P001 Maize plasma membrane 64.04 64.71
Zm00001d002690_P001 Maize plasma membrane 63.36 64.24
Zm00001d051403_P001 Maize plasma membrane 64.04 64.04
Zm00001d002738_P001 Maize plasma membrane 32.53 38.31
Zm00001d026177_P001 Maize extracellular 32.53 38.31
Zm00001d011778_P001 Maize plasma membrane 33.22 38.19
Zm00001d051362_P001 Maize plasma membrane 31.85 37.35
Zm00001d027652_P001 Maize plasma membrane 31.51 36.8
Zm00001d017485_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 30.82 36.0
Zm00001d013956_P003 Maize plasma membrane 32.19 35.88
Zm00001d032610_P003 Maize mitochondrion, plastid 32.53 35.71
Zm00001d019676_P001 Maize endoplasmic reticulum, extracellular, plastid 11.64 32.08
Zm00001d015518_P001 Maize endoplasmic reticulum, extracellular 11.64 32.08
Zm00001d037779_P001 Maize cytosol, plasma membrane, vacuole 27.74 31.76
Zm00001d002952_P001 Maize plasma membrane 28.42 31.32
Zm00001d039713_P001 Maize plasma membrane 26.03 30.52
Zm00001d039293_P001 Maize plastid 28.42 28.92
Zm00001d020747_P001 Maize extracellular 10.27 28.04
Zm00001d026178_P002 Maize plastid 24.66 26.97
Zm00001d010410_P001 Maize plasma membrane, plastid 27.05 25.4
Zm00001d048520_P014 Maize mitochondrion 22.26 24.25
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2EntrezGene:542644EMBL:AF326492InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
UniProt:B6TS83EMBL:BT065379EMBL:EU967848GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0006833GO:GO:0008150GO:GO:0015250
GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271InterPro:MIP
InterPro:MIP_CSProteinID:ONM21048.1ProteinID:ONM21050.1ProteinID:ONM21055.1PFAM:PF00230PRINTS:PR00783
ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF260UniProt:Q9ATM8SUPFAM:SSF81338TIGRFAMs:TIGR00861
TMHMM:TMhelixUniParc:UPI00000A456CEnsemblPlantsGene:Zm00001d005421EnsemblPlants:Zm00001d005421_P001EnsemblPlants:Zm00001d005421_T001SEG:seg
Description
plasma membrane intrinsic protein2Aquaporin PIP2-2
Coordinates
chr2:+:173378742..173382478
Molecular Weight (calculated)
30261.6 Da
IEP (calculated)
8.295
GRAVY (calculated)
0.551
Length
292 amino acids
Sequence
(BLAST)
001: MGKDDVVQSG AGGGEFAAKD YTDPPPAPLV DAAELGSWSL YRAVIAEFIA TLLFLYVTVA TVIGYKHQTD ASASGAGADA ACGGVGVLGI AWAFGGMIFV
101: LVYCTAGISG GHINPAVTFG LFLARKVSLV RALLYMVAQC LGAVCGVGLV KAFQSAYFDR YGGGANSLAS GYSRGAGLGA EIVGTFVLVY TVFSATDPKR
201: NARDSHVPVL APLPIGFAVF MVHLATIPVT GTGINPARSL GAAVVYNKDK PWDDHWIFWV GPLLGAAIAA FYHQYILRAG AIKALGSFRS NA
Best Arabidopsis Sequence Match ( AT3G54820.1 )
(BLAST)
001: MTKEVVGDKR SFSGKDYQDP PPEPLFDATE LGKWSFYRAL IAEFIATLLF LYVTIMTVIG YKSQTDPALN PDQCTGVGVL GIAWAFGGMI FILVYCTAGI
101: SGGHINPAVT FGLLLARKVT LVRAVMYMVA QCLGAICGVA LVKAFQSAYF TRYGGGANGL SDGYSIGTGV AAEIIGTFVL VYTVFSATDP KRSARDSHVP
201: VLAPLPIGFA VFIVHLATIP ITGTGINPAR SLGAAIIYNK DKAWDHHWIF WVGPFAGAAI AAFYHQFVLR AGAIKALGSF RSQPHV
Arabidopsis Description
PIP2-5Probable aquaporin PIP2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV31]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.