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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400000151
PGSC0003DMT400006495
PGSC0003DMT400012780
PGSC0003DMT400014809
PGSC0003DMT400015824
PGSC0003DMT400027154
PGSC0003DMT400032134
PGSC0003DMT400053479

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37180.1 PGSC0003DMT400000151 AT1G01620.1 21798944
AT2G37180.1 PGSC0003DMT400012780 AT1G01620.1 21798944
AT2G37180.1 PGSC0003DMT400014809 AT1G01620.1 21798944
AT2G37180.1 PGSC0003DMT400032134 AT1G01620.1 21798944
AT2G37180.1 PGSC0003DMT400053479 AT1G01620.1 21798944
AT2G37180.1 PGSC0003DMT400006495 AT3G16310.1 21798944
AT2G37180.1 PGSC0003DMT400000151 AT3G61430.1 21798944
AT2G37180.1 PGSC0003DMT400012780 AT3G61430.1 21798944
AT2G37180.1 PGSC0003DMT400014809 AT3G61430.1 21798944
AT2G37180.1 PGSC0003DMT400032134 AT3G61430.1 21798944
AT2G37180.1 PGSC0003DMT400053479 AT3G61430.1 21798944
AT2G37180.1 PGSC0003DMT400000151 AT4G23400.1 21798944
AT2G37180.1 PGSC0003DMT400012780 AT4G23400.1 21798944
AT2G37180.1 PGSC0003DMT400014809 AT4G23400.1 21798944
AT2G37180.1 PGSC0003DMT400032134 AT4G23400.1 21798944
AT2G37180.1 PGSC0003DMT400053479 AT4G23400.1 21798944
AT2G37180.1 PGSC0003DMT400015824 AT4G35100.1 21798944
AT3G53420.1 PGSC0003DMT400027154 AT3G53420.1 19258017
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g084120.1.1 Tomato nucleus 98.93 98.93
PGSC0003DMT400053877 Potato plasma membrane 89.32 89.96
PGSC0003DMT400053882 Potato extracellular 61.92 88.78
CDY70391 Canola extracellular, golgi 46.98 83.02
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 67.26 81.82
CDY46758 Canola plasma membrane 81.85 81.27
Bra023102.1-P Field mustard plasma membrane 81.85 81.27
EER98451 Sorghum plasma membrane 83.63 81.03
TraesCS2A01G198500.1 Wheat plasma membrane 83.63 81.03
PGSC0003DMT400053881 Potato plasma membrane 88.26 80.78
Bra023103.1-P Field mustard plasma membrane 81.85 80.7
CDX91340 Canola plasma membrane 81.85 80.7
CDY46759 Canola plasma membrane 81.85 80.7
TraesCS2B01G225900.1 Wheat golgi 83.27 80.69
TraesCS2D01G206300.1 Wheat golgi 83.27 80.69
Zm00001d019563_P006 Maize plasma membrane 83.27 80.69
AT3G53420.1 Thale cress plasma membrane 82.21 80.49
CDY56697 Canola plasma membrane 82.21 80.49
AT2G37180.1 Thale cress plasma membrane 81.49 80.35
Bra006997.1-P Field mustard plasma membrane 81.85 80.14
CDX78177 Canola plasma membrane 81.85 80.14
Os07t0448800-01 Rice plasma membrane 82.56 80.0
CDX91341 Canola plasma membrane 80.78 79.65
CDY13298 Canola plasma membrane 81.14 79.44
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 67.26 79.41
PGSC0003DMT400062174 Potato plasma membrane 80.43 79.02
PGSC0003DMT400020870 Potato plasma membrane 80.43 78.75
CDX74983 Canola cytosol, peroxisome, plasma membrane 55.16 78.68
PGSC0003DMT400068708 Potato plasma membrane 78.29 77.74
Zm00001d005421_P001 Maize plasma membrane 80.43 77.4
PGSC0003DMT400015824 Potato plasma membrane 76.16 75.62
PGSC0003DMT400009240 Potato cytosol, extracellular, plasma membrane 66.9 74.9
CDX74984 Canola cytosol, peroxisome, plasma membrane 81.85 74.19
AT2G37170.2 Thale cress plasma membrane 81.85 70.12
PGSC0003DMT400053479 Potato plasma membrane 70.82 69.58
PGSC0003DMT400000151 Potato cytosol, peroxisome, plasma membrane 69.75 68.77
HORVU2Hr1G038740.1 Barley golgi, mitochondrion, plasma membrane 83.27 68.62
PGSC0003DMT400014809 Potato peroxisome 69.75 68.29
PGSC0003DMT400012780 Potato cytosol, peroxisome, plasma membrane 69.75 68.06
PGSC0003DMT400032134 Potato cytosol, peroxisome, plasma membrane 68.33 67.13
PGSC0003DMT400060322 Potato mitochondrion 62.63 64.0
PGSC0003DMT400064008 Potato extracellular 21.35 53.57
PGSC0003DMT400042613 Potato cytosol, extracellular, plasma membrane 35.59 40.16
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 34.16 38.4
PGSC0003DMT400068047 Potato cytosol, extracellular, plastid, vacuole 33.81 38.31
PGSC0003DMT400018375 Potato cytosol 32.74 36.8
PGSC0003DMT400072432 Potato cytosol 32.03 36.29
PGSC0003DMT400006558 Potato endoplasmic reticulum, plasma membrane 31.67 35.74
PGSC0003DMT400077927 Potato cytosol, plasma membrane, plastid, vacuole 31.67 35.18
PGSC0003DMT400069330 Potato cytosol 30.96 33.59
PGSC0003DMT400024847 Potato extracellular, plasma membrane, vacuole 29.18 33.2
PGSC0003DMT400039507 Potato cytosol, golgi, plasma membrane 29.54 31.92
PGSC0003DMT400038394 Potato plastid 28.47 31.87
Protein Annotations
Gene3D:1.20.1080.10EntrezGene:102582125MapMan:24.3.1.2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020
GO:GO:0016021GO:GO:0055085InterPro:IPR023271UniProt:M1APA2InterPro:MIPInterPro:MIP_CS
PFAM:PF00230EnsemblPlantsGene:PGSC0003DMG400010475PGSC:PGSC0003DMG400010475EnsemblPlants:PGSC0003DMT400027154PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF158SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI000296F2D6
RefSeq:XP_006339071.1:::::
Description
Plasma membrane intrinsic protein 2-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400010475]
Coordinates
chr10:+:54970610..54973046
Molecular Weight (calculated)
30181.7 Da
IEP (calculated)
8.420
GRAVY (calculated)
0.435
Length
281 amino acids
Sequence
(BLAST)
001: MAKDMEYGND QYAPSKDYQD PPPAPLIDPE ELGKWSFYRA IIAEFIATLL FLYITVLTVI GYKSQSDGDQ CGGVGILGIA WAFGGMIFVL VYCTAGISGG
101: HINPAVTFGL FLARKVSLVR AIFYIVAQCL GAICGCGLVK LFQKAYYVKY GGGANELAVG YNTATGLGAE IIGTFVLVYT VFSATDPKRN ARDSHVPVLA
201: PLPIGFAVFM VHLATIPITG TGINPARSFG AAVIYGKNKS WDDQWIFWVG PFIGAAIAAL YHQYILRAGA SKSINSFRSN A
Best Arabidopsis Sequence Match ( AT3G53420.2 )
(BLAST)
001: MAKDVEAVPG EGFQTRDYQD PPPAPFIDGA ELKKWSFYRA VIAEFVATLL FLYITVLTVI GYKIQSDTDA GGVDCGGVGI LGIAWAFGGM IFILVYCTAG
101: ISGGHINPAV TFGLFLARKV SLPRALLYII AQCLGAICGV GFVKAFQSSY YTRYGGGANS LADGYSTGTG LAAEIIGTFV LVYTVFSATD PKRSARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN KSKPWDDHWI FWVGPFIGAA IAAFYHQFVL RASGSKSLGS FRSAANV
Arabidopsis Description
PIP2-1PIP2A [Source:UniProtKB/TrEMBL;Acc:A0A178V8P4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.