Factsheet for PGSC0003DMT400009240

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, plasma membrane

Predictor Summary:

extracellular 3
golgi 2
plasma membrane 4
endoplasmic reticulum 2
vacuole 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g083510.2.1	Tomato	nucleus	96.81	93.82
GSMUA_Achr5P11480_001	Banana	plasma membrane	58.57	74.24
VIT_03s0038g02520.t01	Wine grape	plasma membrane	80.08	72.04
PGSC0003DMT400053882	Potato	extracellular	56.18	71.94
GSMUA_Achr1P02360_001	Banana	unclear	79.68	70.92
GSMUA_Achr2P11190_001	Banana	plasma membrane	78.88	70.46
Os04t0233400-01	Rice	plasma membrane	78.88	70.21
TraesCS2D01G063900.1	Wheat	plasma membrane	78.49	69.37
TraesCS2B01G077700.1	Wheat	plasma membrane	78.49	69.37
TraesCS2A01G065700.1	Wheat	golgi	78.49	69.37
PGSC0003DMT400068708	Potato	plasma membrane	78.09	69.26
PGSC0003DMT400015824	Potato	plasma membrane	77.69	68.9
PGSC0003DMT400053877	Potato	plasma membrane	74.9	67.38
PGSC0003DMT400027154	Potato	plasma membrane	74.9	66.9
GSMUA_Achr1P07460_001	Banana	extracellular	45.82	65.71
GSMUA_Achr1P26380_001	Banana	plasma membrane	73.31	65.48
PGSC0003DMT400020870	Potato	plasma membrane	74.1	64.81
PGSC0003DMT400062174	Potato	plasma membrane	73.71	64.69
PGSC0003DMT400053479	Potato	plasma membrane	72.91	63.99
PGSC0003DMT400032134	Potato	cytosol, peroxisome, plasma membrane	70.12	61.54
PGSC0003DMT400014809	Potato	peroxisome	70.12	61.32
PGSC0003DMT400012780	Potato	cytosol, peroxisome, plasma membrane	70.12	61.11
PGSC0003DMT400000151	Potato	cytosol, peroxisome, plasma membrane	69.32	61.05
PGSC0003DMT400053881	Potato	plasma membrane	74.5	60.91
PGSC0003DMT400060322	Potato	mitochondrion	64.54	58.91
HORVU2Hr1G010990.2	Barley	plasma membrane	72.51	57.23
PGSC0003DMT400064008	Potato	extracellular	23.9	53.57
PGSC0003DMT400042613	Potato	cytosol, extracellular, plasma membrane	35.86	36.14
PGSC0003DMT400030994	Potato	endoplasmic reticulum, plasma membrane, vacuole	35.46	35.6
PGSC0003DMT400068047	Potato	cytosol, extracellular, plastid, vacuole	35.06	35.48
PGSC0003DMT400072432	Potato	cytosol	33.47	33.87
PGSC0003DMT400069330	Potato	cytosol	34.26	33.2
PGSC0003DMT400006558	Potato	endoplasmic reticulum, plasma membrane	32.67	32.93
PGSC0003DMT400077927	Potato	cytosol, plasma membrane, plastid, vacuole	32.27	32.02
PGSC0003DMT400018375	Potato	cytosol	31.87	32.0
PGSC0003DMT400039507	Potato	cytosol, golgi, plasma membrane	31.87	30.77
PGSC0003DMT400024847	Potato	extracellular, plasma membrane, vacuole	29.88	30.36
PGSC0003DMT400038394	Potato	plastid	27.89	27.89

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:102601661	MapMan:24.3.1.2	ProteinID:AFW90554	ProteinID:AFW90554.1	InterPro:Aquaporin-like
InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	EMBL:JX576198
UniProt:M0ZVU8	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	EnsemblPlantsGene:PGSC0003DMG400003587	PGSC:PGSC0003DMG400003587
EnsemblPlants:PGSC0003DMT400009240	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF196	SUPFAM:SSF81338
TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI000295F3D1	RefSeq:XP_006340945.1	:	:

Description

Aquaporin [Source:PGSC_GENE;Acc:PGSC0003DMG400003587]

Coordinates

chr2:-:39080586..39082143

Molecular Weight (calculated)

26558.6 Da

IEP (calculated)

8.085

GRAVY (calculated)

0.684

Length

251 amino acids

Sequence
(BLAST)

001: MVKDYVDPPS ALLFDTAELN NWSFYRALIA EFVATLLFLY VSVATVIGHK KQVGPCDGVG LVGIAWAFGG MIFVLVYSTA GISGGHINPA VTFGLLLARK
101: VSLLRAVAYM VAQCLGAICG VGLVKGVMKD DYNTHGGGAN TVAVGYSTGA ALGAEVIGTF LLMYTVFSAT DAKRKARDSH VPVLAPLPIG FSVFMVHLAT
201: IPITGTGINP ARSFGAAVIY NDTTAWNDHW IFWVGPFLGA LAAVIYHQQI L

Best Arabidopsis Sequence Match ( AT2G16850.1 )
(BLAST)

001: MSKEVSEEGR HGKDYVDPPP APLLDMAELK LWSFYRAIIA EFIATLLFLY VTVATVIGHK NQTGPCGGVG LLGIAWAFGG MIFVLVYCTA GISGGHINPA
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN

Arabidopsis Description

PIP2-8Probable aquaporin PIP2-8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.