Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g081190.2.1 | Tomato | plastid | 94.76 | 94.76 |
| PGSC0003DMT400014809 | Potato | peroxisome | 91.96 | 91.64 |
| PGSC0003DMT400012780 | Potato | cytosol, peroxisome, plasma membrane | 91.61 | 90.97 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 86.01 | 86.01 |
| Bra032644.1-P | Field mustard | plasma membrane | 85.66 | 85.66 |
| CDX83385 | Canola | cytosol, peroxisome, plasma membrane | 85.66 | 85.66 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 85.66 | 85.37 |
| CDX95670 | Canola | cytosol, peroxisome, plasma membrane | 85.31 | 85.31 |
| CDX74777 | Canola | cytosol, peroxisome, plasma membrane | 85.31 | 85.31 |
| CDY27346 | Canola | cytosol, peroxisome, plasma membrane | 84.97 | 84.97 |
| CDY18886 | Canola | cytosol, peroxisome, plasma membrane | 84.97 | 84.97 |
| CDY37078 | Canola | cytosol, peroxisome, plasma membrane | 84.97 | 84.97 |
| CDY38017 | Canola | plasma membrane | 84.97 | 84.97 |
| CDY48920 | Canola | plasma membrane | 84.97 | 84.97 |
| CDX90046 | Canola | cytosol, peroxisome, plasma membrane | 84.97 | 84.97 |
| Bra033248.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 84.97 | 84.97 |
| CDY66912 | Canola | extracellular | 61.19 | 84.95 |
| CDX71738 | Canola | plasma membrane | 84.62 | 84.62 |
| CDY51161 | Canola | cytosol, peroxisome, plasma membrane | 84.62 | 84.62 |
| CDX89115 | Canola | plasma membrane | 66.43 | 84.44 |
| VIT_02s0025g03390.t01 | Wine grape | peroxisome | 84.62 | 84.32 |
| Bra007603.1-P | Field mustard | plasma membrane | 84.27 | 84.27 |
| Bra004950.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 84.27 | 84.27 |
| CDX74334 | Canola | cytosol, peroxisome, plasma membrane | 84.62 | 84.03 |
| Bra000974.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 84.62 | 84.03 |
| VIT_15s0046g02420.t01 | Wine grape | peroxisome | 83.92 | 83.92 |
| CDY07221 | Canola | cytosol, peroxisome, plasma membrane | 83.92 | 83.92 |
| AT3G61430.1 | Thale cress | plasma membrane | 83.92 | 83.92 |
| CDX91911 | Canola | cytosol, peroxisome, plasma membrane | 84.27 | 83.68 |
| CDY10936 | Canola | plasma membrane | 83.92 | 83.62 |
| AT4G23400.1 | Thale cress | plasma membrane | 83.92 | 83.62 |
| Bra014437.1-P | Field mustard | plasma membrane | 83.57 | 83.57 |
| CDX94185 | Canola | plasma membrane | 83.57 | 83.28 |
| Bra019307.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 83.57 | 83.28 |
| PGSC0003DMT400000151 | Potato | cytosol, peroxisome, plasma membrane | 82.87 | 83.16 |
| KRH59918 | Soybean | peroxisome | 82.87 | 82.58 |
| PGSC0003DMT400053479 | Potato | plasma membrane | 82.52 | 82.52 |
| KRH77555 | Soybean | plasma membrane | 82.17 | 82.17 |
| KRH66037 | Soybean | golgi, peroxisome, plasma membrane | 81.47 | 82.04 |
| KRH41192 | Soybean | endoplasmic reticulum | 82.87 | 82.01 |
| KRH27918 | Soybean | plasma membrane | 81.82 | 81.82 |
| CDY66913 | Canola | cytosol, mitochondrion, nucleus | 12.94 | 80.43 |
| VIT_15s0046g02410.t01 | Wine grape | plasma membrane | 77.27 | 77.27 |
| KRH00178 | Soybean | golgi, peroxisome, plasma membrane | 77.27 | 77.0 |
| CDY15165 | Canola | plastid | 85.66 | 75.62 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 79.37 | 75.42 |
| PGSC0003DMT400053882 | Potato | extracellular | 49.3 | 71.94 |
| PGSC0003DMT400009240 | Potato | cytosol, extracellular, plasma membrane | 61.54 | 70.12 |
| PGSC0003DMT400027154 | Potato | plasma membrane | 67.13 | 68.33 |
| PGSC0003DMT400053877 | Potato | plasma membrane | 65.73 | 67.38 |
| PGSC0003DMT400062174 | Potato | plasma membrane | 66.78 | 66.78 |
| PGSC0003DMT400020870 | Potato | plasma membrane | 66.78 | 66.55 |
| PGSC0003DMT400015824 | Potato | plasma membrane | 65.73 | 66.43 |
| TraesCS2A01G407700.2 | Wheat | golgi, peroxisome, plasma membrane | 66.78 | 66.09 |
| PGSC0003DMT400068708 | Potato | plasma membrane | 64.69 | 65.37 |
| PGSC0003DMT400060322 | Potato | mitochondrion | 60.14 | 62.55 |
| KRH75838 | Soybean | golgi, peroxisome, plasma membrane | 79.37 | 62.53 |
| PGSC0003DMT400053881 | Potato | plasma membrane | 65.03 | 60.59 |
| PGSC0003DMT400064008 | Potato | extracellular | 23.43 | 59.82 |
| PGSC0003DMT400030994 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 30.42 | 34.8 |
| PGSC0003DMT400042613 | Potato | cytosol, extracellular, plasma membrane | 29.72 | 34.14 |
| PGSC0003DMT400069330 | Potato | cytosol | 30.07 | 33.2 |
| PGSC0003DMT400068047 | Potato | cytosol, extracellular, plastid, vacuole | 28.67 | 33.06 |
| PGSC0003DMT400072432 | Potato | cytosol | 28.32 | 32.66 |
| PGSC0003DMT400077927 | Potato | cytosol, plasma membrane, plastid, vacuole | 28.32 | 32.02 |
| PGSC0003DMT400024847 | Potato | extracellular, plasma membrane, vacuole | 27.62 | 31.98 |
| PGSC0003DMT400018375 | Potato | cytosol | 27.62 | 31.6 |
| PGSC0003DMT400006558 | Potato | endoplasmic reticulum, plasma membrane | 27.27 | 31.33 |
| PGSC0003DMT400039507 | Potato | cytosol, golgi, plasma membrane | 27.27 | 30.0 |
| PGSC0003DMT400038394 | Potato | plastid | 24.83 | 28.29 |
Protein Annotations
| Gene3D:1.20.1080.10 | EntrezGene:102595835 | MapMan:24.3.1.2 | ProteinID:ABB16992 | ProteinID:ABB16992.1 | InterPro:Aquaporin-like |
| InterPro:Aquaporin_transptr | EMBL:DQ228343 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 |
| UniProt:M1AWY0 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | EnsemblPlantsGene:PGSC0003DMG400012337 | PGSC:PGSC0003DMG400012337 |
| EnsemblPlants:PGSC0003DMT400032134 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF169 | SUPFAM:SSF81338 |
| TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI0001B3657C | RefSeq:XP_006343971.1 | : | : |
Description
Aquaporin PIP-type pTOM75 [Source:PGSC_GENE;Acc:PGSC0003DMG400012337]
Coordinates
chr8:+:54876227..54879595
Molecular Weight (calculated)
30688.7 Da
IEP (calculated)
9.338
GRAVY (calculated)
0.451
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENKEEDVK LGANKFRETQ PLGTSAQTDK DYKEPPPAPL FEPGELSSWS FYRAGIAEFM ATFLFLYITI LTVMGLKRSD SLCSSVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTL GLFLARKLSL TRSVFYIVMQ CLGAICGAGV VKGFMVGPYQ RLGGGANVVA PGYTIGSGLG AEIIGTFVLV YTVFSATDAK
201: RNARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIFNDK HAWRDHWIFW VGPIIGAILA AAYHQIIIRA MPFRRS
101: ALVYCTAGIS GGHINPAVTL GLFLARKLSL TRSVFYIVMQ CLGAICGAGV VKGFMVGPYQ RLGGGANVVA PGYTIGSGLG AEIIGTFVLV YTVFSATDAK
201: RNARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIFNDK HAWRDHWIFW VGPIIGAILA AAYHQIIIRA MPFRRS
001: MEGKEEDVRV GANKFPERQP IGTSAQSTDK DYKEPPPAPL FEPGELSSWS FYRAGIAEFI ATFLFLYITV LTVMGVKRAP NMCASVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRAVFYMIMQ CLGAICGAGV VKGFQPTPYQ TLGGGANTVA HGYTKGSGLG AEIIGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HSWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKS
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRAVFYMIMQ CLGAICGAGV VKGFQPTPYQ TLGGGANTVA HGYTKGSGLG AEIIGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HSWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKS
Arabidopsis Description
PIP1.4TMP-C [Source:UniProtKB/TrEMBL;Acc:A0A178USZ7]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.