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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • endoplasmic reticulum 1
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, peroxisome, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90046 Canola cytosol, peroxisome, plasma membrane 86.42 97.9
CDY38017 Canola plasma membrane 86.42 97.9
CDY51161 Canola cytosol, peroxisome, plasma membrane 85.49 96.85
CDX74334 Canola cytosol, peroxisome, plasma membrane 85.49 96.18
CDY07221 Canola cytosol, peroxisome, plasma membrane 84.88 96.15
CDX91911 Canola cytosol, peroxisome, plasma membrane 85.19 95.83
CDY66913 Canola cytosol, mitochondrion, nucleus 13.58 95.65
CDX71738 Canola plasma membrane 83.64 94.76
CDY27346 Canola cytosol, peroxisome, plasma membrane 83.33 94.41
CDY37078 Canola cytosol, peroxisome, plasma membrane 83.33 94.41
CDY48920 Canola plasma membrane 83.33 94.41
CDX89115 Canola plasma membrane 65.43 94.22
CDX74777 Canola cytosol, peroxisome, plasma membrane 83.02 94.06
CDX83385 Canola cytosol, peroxisome, plasma membrane 82.72 93.71
CDY18886 Canola cytosol, peroxisome, plasma membrane 82.72 93.71
CDX95670 Canola cytosol, peroxisome, plasma membrane 82.41 93.36
CDY66912 Canola extracellular 58.95 92.72
CDY10936 Canola plasma membrane 82.1 92.68
CDX94185 Canola plasma membrane 81.17 91.64
GSMUA_AchrUn_... Banana extracellular 52.78 90.0
GSMUA_Achr5P12400_001 Banana extracellular 52.47 89.47
VIT_13s0067g00220.t01 Wine grape plasma membrane 78.7 89.16
TraesCS6B01G398000.1 Wheat extracellular 35.19 89.06
PGSC0003DMT400000151 Potato cytosol, peroxisome, plasma membrane 77.47 88.07
Solyc01g094690.2.1 Tomato nucleus 77.47 88.07
Os04t0559700-01 Rice plasma membrane 78.09 87.85
KRH59918 Soybean peroxisome 77.16 87.11
Solyc08g008050.2.1 Tomato peroxisome 77.16 87.11
GSMUA_Achr8P11540_001 Banana extracellular 50.93 86.84
GSMUA_AchrUn_... Banana extracellular 50.93 86.84
TraesCS2B01G425600.1 Wheat golgi, plasma membrane 77.16 86.81
KRH27918 Soybean plasma membrane 76.54 86.71
KRH77555 Soybean plasma membrane 76.54 86.71
PGSC0003DMT400012780 Potato cytosol, peroxisome, plasma membrane 76.85 86.46
PGSC0003DMT400014809 Potato peroxisome 76.54 86.41
Solyc08g081190.2.1 Tomato plastid 76.23 86.36
TraesCS6B01G279200.1 Wheat plastid 77.16 86.21
KRH41192 Soybean endoplasmic reticulum 76.85 86.16
Solyc12g056220.1.1 Tomato plastid 76.54 86.11
PGSC0003DMT400053479 Potato plasma membrane 75.93 86.01
EES07484 Sorghum plasma membrane 76.54 85.81
Zm00001d017526_P001 Maize plasma membrane 76.54 85.81
PGSC0003DMT400032134 Potato cytosol, peroxisome, plasma membrane 75.62 85.66
KRH66037 Soybean golgi, peroxisome, plasma membrane 75.0 85.56
HORVU6Hr1G064140.1 Barley golgi, peroxisome, plasma membrane 76.54 85.52
Zm00001d002690_P001 Maize plasma membrane 75.93 85.42
Zm00001d051403_P001 Maize plasma membrane 76.85 85.27
TraesCS6D01G227500.1 Wheat golgi 76.23 85.17
Os02t0666200-01 Rice plasma membrane 75.93 85.12
TraesCS2B01G605900.1 Wheat golgi, peroxisome, plasma membrane 75.93 85.12
EES11257 Sorghum cytosol, peroxisome, plasma membrane 75.62 85.07
Solyc03g096290.2.1 Tomato nucleus 75.0 84.97
TraesCS5B01G178700.1 Wheat plasma membrane 76.23 84.59
TraesCS5D01G185400.1 Wheat plasma membrane 76.23 84.59
TraesCS6D01G389500.1 Wheat plasma membrane 76.23 84.59
TraesCS6B01G450200.1 Wheat plastid 75.93 84.25
TraesCS6B01G450000.1 Wheat unclear 75.62 83.9
TraesCS6D01G389400.1 Wheat plasma membrane 75.62 83.9
Zm00001d051872_P001 Maize plasma membrane 74.38 83.68
KRH00178 Soybean golgi, peroxisome, plasma membrane 73.15 82.58
OQU85985 Sorghum cytosol, peroxisome, plasma membrane 72.84 81.38
HORVU5Hr1G055200.4 Barley golgi, plastid 76.54 79.74
EER89434 Sorghum peroxisome 71.6 78.38
TraesCS2D01G404800.2 Wheat golgi, peroxisome, plasma membrane 70.99 73.25
CDY70391 Canola extracellular, golgi 35.49 72.33
CDX69112 Canola plasma membrane 61.42 70.82
CDX76314 Canola cytosol 61.42 70.82
CDY52648 Canola plasma membrane 61.42 70.82
CDY17511 Canola plasma membrane 61.11 70.46
CDX67611 Canola plasma membrane 60.8 68.88
CDY07519 Canola plasma membrane 60.8 68.88
CDX78177 Canola plasma membrane 60.8 68.64
CDY56697 Canola plasma membrane 60.8 68.64
CDX72515 Canola golgi, plasma membrane 53.7 68.5
CDY09192 Canola plasma membrane 54.63 68.34
CDY13298 Canola plasma membrane 60.49 68.29
CDY46758 Canola plasma membrane 59.57 68.2
CDX78265 Canola plasma membrane 60.19 68.18
CDX71032 Canola plasma membrane 54.63 68.08
CDX73446 Canola peroxisome 59.88 67.83
CDX91340 Canola plasma membrane 59.57 67.72
CDY46759 Canola plasma membrane 59.57 67.72
CDX88767 Canola plasma membrane 54.32 67.69
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 60.19 67.47
CDX91341 Canola plasma membrane 58.95 67.02
CDY31523 Canola plasma membrane 53.7 66.92
CDX74983 Canola cytosol, peroxisome, plasma membrane 40.43 66.5
CDY53629 Canola cytosol 53.09 66.41
KRH75838 Soybean golgi, peroxisome, plasma membrane 73.15 65.29
CDY14415 Canola cytosol, peroxisome, plasma membrane 57.72 64.93
CDY07681 Canola plasma membrane 57.41 64.58
CDX74984 Canola cytosol, peroxisome, plasma membrane 59.57 62.26
CDX97733 Canola endoplasmic reticulum, extracellular 27.78 36.29
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 27.78 36.29
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 27.78 36.14
CDX82410 Canola plasma membrane 27.47 35.74
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 27.47 35.74
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 22.84 35.24
CDY66321 Canola plasma membrane 28.7 34.96
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 26.85 34.8
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 26.85 34.8
CDX68239 Canola cytosol 28.09 34.34
CDY11123 Canola cytosol 28.09 34.34
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 26.54 34.26
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 26.54 34.26
CDY48045 Canola golgi, mitochondrion, plasma membrane 28.09 34.21
CDX77009 Canola cytosol, plasma membrane, vacuole 25.93 33.73
CDY07142 Canola cytosol 26.23 33.73
CDY69446 Canola cytosol 26.23 33.73
CDY28539 Canola plasma membrane 26.23 33.6
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 26.23 33.6
CDY48983 Canola plasma membrane 26.23 33.6
CDX96453 Canola cytosol 27.47 33.58
CDY66645 Canola plastid 22.84 33.48
CDY67380 Canola plastid 22.84 33.48
CDY19176 Canola plasma membrane 27.47 33.33
CDY26214 Canola plasma membrane 27.47 33.33
CDX72962 Canola plasma membrane 27.16 33.21
CDY51678 Canola plasma membrane, vacuole 25.62 33.2
CDY53270 Canola plasma membrane 25.62 33.07
CDY35336 Canola extracellular 14.51 32.87
CDX83623 Canola golgi, plasma membrane, plastid 25.62 32.81
CDY13639 Canola plasma membrane 25.62 32.81
CDX81850 Canola golgi, mitochondrion, plasma membrane 26.85 32.58
CDY21731 Canola golgi, mitochondrion, plasma membrane 26.85 32.58
CDX75873 Canola extracellular, golgi, vacuole 27.16 32.0
CDY47413 Canola mitochondrion, plastid 23.46 29.46
CDX99048 Canola mitochondrion, plastid 23.15 29.07
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2GO:A0A078FL43UniProt:A0A078FL43InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY15165ProteinID:CDY15165ProteinID:CDY15165.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00085342001InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783
ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF202SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelix
UniParc:UPI0004EDFDDDSEG:seg::::
Description
BnaC05g00440DBnaC05g00440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FL43]
Coordinates
chrLK032052:+:205882..207501
Molecular Weight (calculated)
35192.0 Da
IEP (calculated)
9.997
GRAVY (calculated)
0.186
Length
324 amino acids
Sequence
(BLAST)
001: MSLSQQLISH SLTIHCRIKR KPQNFNVQRE RERKDKGKME GKEEDVRVGA NKFPERQPIG TSAQTDKDYK EPPPAPLFEP GELSSWSFWR AGIAEFIATF
101: LFLYITVLTV MGVKRAPNMC ASVGIQGIAW AFGGMIFALV YCTAGISGGH INPAVTFGLF LARKLSLTRA VFYMVMQCLG AICGAGVVKG FQPSPYQTLG
201: GGANTVAPGY TKGSGLGAEI IGTFVLVYTV FSATDAKRSA RDSHVPILAP LPIGFAVFLV HLATIPITGT GINPARSLGA AIIYNKDHSW DDHWIFWVGP
301: FIGAALAALY HQLVIRAIPF KTRT
Best Arabidopsis Sequence Match ( AT1G01620.1 )
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS
Arabidopsis Description
PIP1-3TMP-B [Source:UniProtKB/TrEMBL;Acc:A0A178WIA6]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.