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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G065700.1
TraesCS2A01G198500.1
TraesCS2B01G077700.1
TraesCS2B01G225900.1
TraesCS2D01G063900.1
TraesCS2D01G206300.1
TraesCS5A01G316300.1
TraesCS5B01G316800.1
TraesCS5D01G322500.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01620.1 TraesCS2A01G065700.1 AT2G16850.1 21798944
AT1G01620.1 TraesCS2B01G077700.1 AT2G16850.1 21798944
AT1G01620.1 TraesCS2D01G063900.1 AT2G16850.1 21798944
AT1G01620.1 TraesCS2A01G198500.1 AT2G37180.1 21798944
AT1G01620.1 TraesCS2B01G225900.1 AT2G37180.1 21798944
AT1G01620.1 TraesCS2D01G206300.1 AT2G37180.1 21798944
AT1G01620.1 TraesCS2A01G198500.1 AT3G54820.1 21798944
AT1G01620.1 TraesCS2B01G225900.1 AT3G54820.1 21798944
AT1G01620.1 TraesCS2D01G206300.1 AT3G54820.1 21798944
AT4G00430.1 TraesCS2A01G065700.1 AT2G16850.1 21798944
AT4G00430.1 TraesCS2B01G077700.1 AT2G16850.1 21798944
AT4G00430.1 TraesCS2D01G063900.1 AT2G16850.1 21798944
AT4G00430.1 TraesCS2A01G198500.1 AT2G37180.1 21798944
AT4G00430.1 TraesCS2B01G225900.1 AT2G37180.1 21798944
AT4G00430.1 TraesCS2D01G206300.1 AT2G37180.1 21798944
AT4G00430.1 TraesCS2A01G198500.1 AT3G54820.1 21798944
AT4G00430.1 TraesCS2B01G225900.1 AT3G54820.1 21798944
AT4G00430.1 TraesCS2D01G206300.1 AT3G54820.1 21798944
AT4G00430.1 TraesCS5A01G316300.1 AT4G24090.1 21798944
AT4G00430.1 TraesCS5B01G316800.1 AT4G24090.1 21798944
AT4G00430.1 TraesCS5D01G322500.1 AT4G24090.1 21798944
AT4G23400.1 TraesCS2A01G198500.1 AT2G37180.1 21798944
AT4G23400.1 TraesCS2B01G225900.1 AT2G37180.1 21798944
AT4G23400.1 TraesCS2D01G206300.1 AT2G37180.1 21798944
AT4G23400.1 TraesCS2A01G198500.1 AT3G54820.1 21798944
AT4G23400.1 TraesCS2B01G225900.1 AT3G54820.1 21798944
AT4G23400.1 TraesCS2D01G206300.1 AT3G54820.1 21798944
AT4G23400.1 TraesCS2A01G065700.1 AT4G35100.1 21798944
AT4G23400.1 TraesCS2B01G077700.1 AT4G35100.1 21798944
AT4G23400.1 TraesCS2D01G063900.1 AT4G35100.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G405600.1 Wheat plasma membrane 100.0 100.0
TraesCS6B01G450000.1 Wheat unclear 100.0 100.0
TraesCS6D01G389500.1 Wheat plasma membrane 98.63 98.63
TraesCS5D01G185400.1 Wheat plasma membrane 97.26 97.26
GSMUA_Achr8P11540_001 Banana extracellular 57.88 88.95
CDX89115 Canola plasma membrane 67.81 88.0
TraesCS6D01G227500.1 Wheat golgi 87.33 87.93
GSMUA_AchrUn_... Banana extracellular 57.19 87.89
CDY66912 Canola extracellular 61.64 87.38
AT1G01620.1 Thale cress golgi, peroxisome, plasma membrane 85.27 87.06
AT4G23400.1 Thale cress plasma membrane 85.27 86.76
CDY10936 Canola plasma membrane 84.93 86.41
CDX83385 Canola cytosol, peroxisome, plasma membrane 84.59 86.36
CDY38017 Canola plasma membrane 84.25 86.01
Solyc03g096290.2.1 Tomato nucleus 84.25 86.01
CDX74777 Canola cytosol, peroxisome, plasma membrane 84.25 86.01
AT3G61430.1 Thale cress plasma membrane 84.25 86.01
CDX95670 Canola cytosol, peroxisome, plasma membrane 84.25 86.01
Solyc01g094690.2.1 Tomato nucleus 83.9 85.96
CDY18886 Canola cytosol, peroxisome, plasma membrane 83.9 85.66
CDY27346 Canola cytosol, peroxisome, plasma membrane 83.9 85.66
CDY37078 Canola cytosol, peroxisome, plasma membrane 83.9 85.66
AT4G00430.1 Thale cress golgi, peroxisome, plasma membrane 83.9 85.37
CDY48920 Canola plasma membrane 83.56 85.31
CDY51161 Canola cytosol, peroxisome, plasma membrane 83.56 85.31
CDX71738 Canola plasma membrane 83.56 85.31
CDX90046 Canola cytosol, peroxisome, plasma membrane 83.56 85.31
CDX74334 Canola cytosol, peroxisome, plasma membrane 83.56 84.72
CDX94185 Canola plasma membrane 83.22 84.67
CDY07221 Canola cytosol, peroxisome, plasma membrane 82.88 84.62
CDX91911 Canola cytosol, peroxisome, plasma membrane 83.22 84.38
Solyc12g056220.1.1 Tomato plastid 82.53 83.68
Solyc08g008050.2.1 Tomato peroxisome 81.85 83.28
Solyc08g081190.2.1 Tomato plastid 80.82 82.52
EER89434 Sorghum peroxisome 79.45 78.38
CDY15165 Canola plastid 83.9 75.62
AT2G45960.3 Thale cress golgi, peroxisome, plasma membrane 76.71 74.42
TraesCS2D01G404800.2 Wheat golgi, peroxisome, plasma membrane 79.79 74.2
CDY66913 Canola cytosol, mitochondrion, nucleus 11.64 73.91
TraesCS2D01G063900.1 Wheat plasma membrane 67.81 69.72
TraesCS5D01G112500.1 Wheat plasma membrane 65.75 67.13
TraesCS2D01G376000.1 Wheat golgi 66.44 66.9
TraesCS6D01G212900.1 Wheat golgi, plasma membrane 65.41 66.78
TraesCS2D01G376100.1 Wheat plasma membrane 66.1 66.55
TraesCS2D01G206300.1 Wheat golgi 65.75 66.21
TraesCS5D01G561700.1 Wheat golgi, peroxisome, plasma membrane 62.33 64.08
TraesCS5D01G338200.1 Wheat plasma membrane 59.59 59.79
TraesCS4D01G355600.1 Wheat golgi, peroxisome, plasma membrane 59.25 59.25
TraesCS5D01G560400.1 Wheat golgi, peroxisome, plasma membrane 58.9 59.11
TraesCS5D01G548900.1 Wheat golgi, peroxisome, plasma membrane 58.22 58.82
TraesCS6D01G076400.1 Wheat golgi, peroxisome, plasma membrane 56.51 55.93
TraesCS7D01G192200.1 Wheat golgi, peroxisome, plasma membrane 53.42 51.32
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 29.45 34.54
TraesCS2D01G411400.1 Wheat plasma membrane 29.11 34.27
TraesCS3D01G540900.1 Wheat plasma membrane 29.45 34.13
TraesCS3D01G163400.1 Wheat endoplasmic reticulum, extracellular, vacuole 27.74 32.93
TraesCS4D01G308800.1 Wheat golgi, plasma membrane, vacuole 28.08 31.91
TraesCS7D01G339600.1 Wheat plasma membrane 29.79 31.18
TraesCS2D01G370800.1 Wheat plasma membrane 27.74 30.57
TraesCS2D01G411500.1 Wheat endoplasmic reticulum 27.4 30.53
TraesCS1D01G175200.1 Wheat unclear 27.4 30.42
TraesCS4D01G344300.1 Wheat plasma membrane 22.6 25.88
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF262SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixEnsemblPlantsGene:TraesCS6D01G389400
EnsemblPlants:TraesCS6D01G389400.1TIGR:cd00333SEG:seg:::
Description
No Description!
Coordinates
chr6D:+:464984426..464985925
Molecular Weight (calculated)
30877.4 Da
IEP (calculated)
8.302
GRAVY (calculated)
0.395
Length
292 amino acids
Sequence
(BLAST)
001: MEGKEEDVRL GANRYSEHQP IGTAAQGGGA DEKDYKEPPP APFFEAGELT SWSFYRAGIA EFLATFLFLY ISVLTVMGVV GNPSGSKCGT VGIQGIAWSF
101: GGMIFVLVYC TAGISGGHIN PAVTFGLFLA RKLSLTRAVF YIVMQCLGAI CGAGVVKGFQ TTLYQGNGGG ANSVAPGYTK GDGLGAEIVG TFVLVYTVFS
201: ATDAKRSARD SHVPILAPLP IGFAVFLVHL ATIPITGTGI NPARSLGAAI IYNKKQAWDD HWIFWVGPFI GAALAAIYHV VVIRAIPFKS RD
Best Arabidopsis Sequence Match ( AT1G01620.1 )
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS
Arabidopsis Description
PIP1-3TMP-B [Source:UniProtKB/TrEMBL;Acc:A0A178WIA6]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.