Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- peroxisome 2
- plasma membrane 2
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P11540_001 | Banana | extracellular | 54.73 | 85.26 |
| GSMUA_AchrUn_... | Banana | extracellular | 54.05 | 84.21 |
| CDX89115 | Canola | plasma membrane | 62.16 | 81.78 |
| CDY66912 | Canola | extracellular | 56.76 | 81.55 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 78.38 | 81.12 |
| CDX90046 | Canola | cytosol, peroxisome, plasma membrane | 78.38 | 81.12 |
| EES07484 | Sorghum | plasma membrane | 79.05 | 80.97 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 78.38 | 80.84 |
| CDX71738 | Canola | plasma membrane | 78.04 | 80.77 |
| CDY48920 | Canola | plasma membrane | 78.04 | 80.77 |
| CDY38017 | Canola | plasma membrane | 78.04 | 80.77 |
| CDX95670 | Canola | cytosol, peroxisome, plasma membrane | 78.04 | 80.77 |
| TraesCS5A01G181000.1 | Wheat | plastid | 79.05 | 80.69 |
| EES11257 | Sorghum | cytosol, peroxisome, plasma membrane | 78.38 | 80.56 |
| AT4G23400.1 | Thale cress | plasma membrane | 78.04 | 80.49 |
| CDY10936 | Canola | plasma membrane | 78.04 | 80.49 |
| AT3G61430.1 | Thale cress | plasma membrane | 77.7 | 80.42 |
| CDY51161 | Canola | cytosol, peroxisome, plasma membrane | 77.7 | 80.42 |
| Solyc03g096290.2.1 | Tomato | nucleus | 77.7 | 80.42 |
| CDX83385 | Canola | cytosol, peroxisome, plasma membrane | 77.7 | 80.42 |
| OQU85985 | Sorghum | cytosol, peroxisome, plasma membrane | 78.72 | 80.34 |
| CDX91911 | Canola | cytosol, peroxisome, plasma membrane | 78.04 | 80.21 |
| TraesCS5B01G178700.1 | Wheat | plasma membrane | 79.05 | 80.14 |
| TraesCS5D01G185400.1 | Wheat | plasma membrane | 79.05 | 80.14 |
| TraesCS6D01G389500.1 | Wheat | plasma membrane | 79.05 | 80.14 |
| TraesCS6A01G405700.1 | Wheat | golgi | 79.05 | 80.14 |
| CDX74777 | Canola | cytosol, peroxisome, plasma membrane | 77.36 | 80.07 |
| CDY07221 | Canola | cytosol, peroxisome, plasma membrane | 77.36 | 80.07 |
| CDX74334 | Canola | cytosol, peroxisome, plasma membrane | 77.7 | 79.86 |
| TraesCS6B01G450200.1 | Wheat | plastid | 78.72 | 79.79 |
| CDY37078 | Canola | cytosol, peroxisome, plasma membrane | 77.03 | 79.72 |
| CDY27346 | Canola | cytosol, peroxisome, plasma membrane | 77.03 | 79.72 |
| CDY18886 | Canola | cytosol, peroxisome, plasma membrane | 77.03 | 79.72 |
| TraesCS6B01G450000.1 | Wheat | unclear | 78.38 | 79.45 |
| TraesCS6D01G389400.1 | Wheat | plasma membrane | 78.38 | 79.45 |
| TraesCS6A01G405600.1 | Wheat | plasma membrane | 78.38 | 79.45 |
| CDX94185 | Canola | plasma membrane | 76.35 | 78.75 |
| Solyc01g094690.2.1 | Tomato | nucleus | 75.68 | 78.6 |
| Solyc08g081190.2.1 | Tomato | plastid | 74.32 | 76.92 |
| Solyc12g056220.1.1 | Tomato | plastid | 74.66 | 76.74 |
| Solyc08g008050.2.1 | Tomato | peroxisome | 74.32 | 76.66 |
| HORVU5Hr1G055200.4 | Barley | golgi, plastid | 78.72 | 74.92 |
| CDY15165 | Canola | plastid | 78.38 | 71.6 |
| CDY66913 | Canola | cytosol, mitochondrion, nucleus | 10.81 | 69.57 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 70.27 | 69.1 |
| EES11124 | Sorghum | plasma membrane | 64.19 | 65.07 |
| EER98453 | Sorghum | plasma membrane | 62.84 | 65.03 |
| EER98452 | Sorghum | plasma membrane | 62.5 | 64.69 |
| EER98457 | Sorghum | plasma membrane | 62.5 | 64.69 |
| OQU91911 | Sorghum | plasma membrane | 61.49 | 64.54 |
| EER98451 | Sorghum | plasma membrane | 63.18 | 64.48 |
| EER98454 | Sorghum | plasma membrane | 62.16 | 64.34 |
| EES05459 | Sorghum | plasma membrane | 62.16 | 63.67 |
| OQU88961 | Sorghum | plastid | 60.14 | 47.59 |
| KXG36091 | Sorghum | cytosol, peroxisome, plasma membrane | 45.27 | 41.1 |
| EES12617 | Sorghum | plasma membrane | 28.72 | 34.14 |
| EER89797 | Sorghum | plasma membrane | 28.04 | 33.47 |
| KXG31086 | Sorghum | golgi, plasma membrane, vacuole | 27.03 | 32.13 |
| EER94020 | Sorghum | golgi, mitochondrion, plasma membrane | 28.38 | 31.58 |
| EES04303 | Sorghum | cytosol | 27.36 | 31.4 |
| EES11105 | Sorghum | mitochondrion, plasma membrane | 28.04 | 30.97 |
| EES02191 | Sorghum | cytosol | 26.35 | 30.95 |
| EER92857 | Sorghum | cytosol | 26.01 | 30.8 |
| OQU82093 | Sorghum | plasma membrane | 26.01 | 28.84 |
| EER95659 | Sorghum | mitochondrion | 25.34 | 27.68 |
| KXG31483 | Sorghum | extracellular, golgi, plasma membrane | 22.3 | 26.09 |
| EES17913 | Sorghum | cytosol, plastid | 24.66 | 23.25 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | EntrezGene:8065486 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | UniProt:C5Z6X2 |
| EnsemblPlants:EER89434 | ProteinID:EER89434 | ProteinID:EER89434.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 |
| GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF140 | EnsemblPlantsGene:SORBI_3010G087900 | SUPFAM:SSF81338 | unigene:Sbi.5090 | TIGRFAMs:TIGR00861 |
| TMHMM:TMhelix | UniParc:UPI0001A89882 | RefSeq:XP_002438067.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:7521029..7522397
Molecular Weight (calculated)
30859.2 Da
IEP (calculated)
8.310
GRAVY (calculated)
0.476
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGNRSQDE DVRVGVDRFP ERQPIGTTAA DDLGGRDYSE PPAAPLFESS ELSSWSFYRA GIAEFVATFL FLYVTVLTVM GVSKSPSKCG TVGIQGIAWA
101: FGGMIFALVY CTAGVSGGHI NPAVTFGLLL ARKLSLARAV YYVVMQCLGA VCGAGVVKAL VGSALYQSAG GGANAVAPGY TKGDGLGAEI VGTFVLVYTV
201: FSATDAKRSA RDSHVPVLAP LPIGFAVFLV HLATIPITGT GINPARSLGA AIIYDSPHGW HGHWIFWVGP FAGAALAAVY HQVVIRAIPF KSSAHY
101: FGGMIFALVY CTAGVSGGHI NPAVTFGLLL ARKLSLARAV YYVVMQCLGA VCGAGVVKAL VGSALYQSAG GGANAVAPGY TKGDGLGAEI VGTFVLVYTV
201: FSATDAKRSA RDSHVPVLAP LPIGFAVFLV HLATIPITGT GINPARSLGA AIIYDSPHGW HGHWIFWVGP FAGAALAAVY HQVVIRAIPF KSSAHY
001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS
Arabidopsis Description
PIP1-3TMP-B [Source:UniProtKB/TrEMBL;Acc:A0A178WIA6]
SUBAcon: [golgi,plasma membrane,peroxisome]
SUBAcon: [golgi,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.