CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003006_P001	Maize	plasma membrane	94.86	97.19
Os04t0521100-01	Rice	plasma membrane	91.78	92.41
GSMUA_AchrUn_...	Banana	extracellular	60.62	90.77
EES05459	Sorghum	plasma membrane	89.38	90.31
GSMUA_Achr8P18910_001	Banana	extracellular	60.27	89.8
GSMUA_Achr11P...	Banana	extracellular	59.59	88.78
GSMUA_Achr4P20780_001	Banana	extracellular	59.25	88.27
EER98452	Sorghum	plasma membrane	83.9	85.66
EER98453	Sorghum	plasma membrane	83.9	85.66
EER98454	Sorghum	plasma membrane	82.88	84.62
EER98457	Sorghum	plasma membrane	82.53	84.27
EER98451	Sorghum	plasma membrane	83.22	83.79
OQU91911	Sorghum	plasma membrane	72.6	75.18
EES07484	Sorghum	plasma membrane	65.75	66.44
EES11257	Sorghum	cytosol, peroxisome, plasma membrane	65.41	66.32
OQU85985	Sorghum	cytosol, peroxisome, plasma membrane	65.75	66.21
EER89434	Sorghum	peroxisome	65.07	64.19
OQU88961	Sorghum	plastid	81.51	63.64
KXG36091	Sorghum	cytosol, peroxisome, plasma membrane	53.77	48.16
EES12617	Sorghum	plasma membrane	31.85	37.35
EER89797	Sorghum	plasma membrane	31.51	37.1
KXG31086	Sorghum	golgi, plasma membrane, vacuole	30.82	36.14
EES04303	Sorghum	cytosol	30.14	34.11
EER92857	Sorghum	cytosol	29.11	34.0
EES02191	Sorghum	cytosol	28.77	33.33
EER94020	Sorghum	golgi, mitochondrion, plasma membrane	29.79	32.71
EES11105	Sorghum	mitochondrion, plasma membrane	28.77	31.34
OQU82093	Sorghum	plasma membrane	26.03	28.46
KXG31483	Sorghum	extracellular, golgi, plasma membrane	24.66	28.46
EER95659	Sorghum	mitochondrion	25.34	27.31
EES17913	Sorghum	cytosol, plastid	26.37	24.52

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	EntrezGene:8075940	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	UniProt:C5YCE6
EnsemblPlants:EES11124	ProteinID:EES11124	ProteinID:EES11124.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150
GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF137	EnsemblPlantsGene:SORBI_3006G150100	SUPFAM:SSF81338	unigene:Sbi.18131	TIGRFAMs:TIGR00861
TMHMM:TMhelix	UniParc:UPI0001A86E1F	RefSeq:XP_002446796.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:51145123..51147729

Molecular Weight (calculated)

30462.8 Da

IEP (calculated)

7.974

GRAVY (calculated)

0.501

Length

292 amino acids

Sequence
(BLAST)

001: MAKDIEAAAA AHGGGGEYTA KDYSDPPPAP LVDAEELTKW SLYRAVIAEF VATLLFLYIT VATVIGYKHQ TDASSSGPDA ACGGVGILGI AWAFGGMIFI
101: LVYCTAGVSG GHINPAVTFG LFLARKVSLV RALLYIVAQC LGAICGVGLV KGFQSAFYVR YGGGANGLSD GYSKGTGLAA EIIGTFVLVY TVFSATDPKR
201: NARDSHVPVL APLPIGFAVF MVHLATIPIT GTGINPARSL GAAVIYNNDK TWDDHWIFWV GPFIGAAIAA AYHQYVLRAS AAKLGSSASF SR

Best Arabidopsis Sequence Match ( AT2G37170.2 )
(BLAST)

001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV

Arabidopsis Description

PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.