Factsheet for Os04t0521100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 18557835
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003006_P001	Maize	plasma membrane	91.38	92.98
EES11124	Sorghum	plasma membrane	92.41	91.78
GSMUA_AchrUn_...	Banana	extracellular	60.34	89.74
Os02t0629200-02	Rice	plasma membrane	88.97	89.58
GSMUA_Achr8P18910_001	Banana	extracellular	60.0	88.78
GSMUA_Achr11P...	Banana	extracellular	59.66	88.27
GSMUA_Achr4P20780_001	Banana	extracellular	59.31	87.76
Os07t0448800-01	Rice	plasma membrane	82.76	82.76
Os07t0448100-01	Rice	plasma membrane	80.34	81.47
Os07t0448400-01	Rice	plasma membrane	36.55	78.52
Os04t0233400-01	Rice	plasma membrane	74.14	76.24
Os07t0448200-00	Rice	mitochondrion, nucleus, plastid	64.83	67.87
Os09t0541000-01	Rice	cytosol, plasma membrane, vacuole	66.9	66.9
Os04t0559700-01	Rice	plasma membrane	65.86	66.32
Os02t0666200-01	Rice	plasma membrane	65.52	65.74
Os03t0861300-01	Rice	cytosol, peroxisome, plasma membrane	62.41	64.64
Os10t0481100-01	Rice	plasma membrane	19.31	60.22
Os06t0336200-01	Rice	nucleus	31.72	37.1
Os02t0658100-01	Rice	vacuole	24.83	34.95
Os04t0550900-00	Rice	endoplasmic reticulum, extracellular, vacuole	16.55	33.8
Os01t0232000-00	Rice	cytosol, endoplasmic reticulum, plasma membrane	28.97	33.47
Os03t0146100-01	Rice	nucleus	28.62	33.2
Os01t0232100-01	Rice	cytosol, endoplasmic reticulum, extracellular	27.59	31.25
Os04t0527900-01	Rice	plastid	28.28	30.94
Os10t0492600-01	Rice	plastid	27.59	30.3
Os04t0550800-01	Rice	endoplasmic reticulum, plasma membrane	25.86	27.88
Os05t0231700-01	Rice	golgi, mitochondrion, plasma membrane	27.93	25.8

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	EntrezGene:4336424	EMBL:AK243592	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
ProteinID:BAF15249.1	ProteinID:BAS90124.1	ProteinID:CAD41442.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150
GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	EnsemblPlantsGene:Os04g0521100	EnsemblPlants:Os04t0521100-01	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF137	UniProt:Q7XUA6	SUPFAM:SSF81338
TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00001B18F9	RefSeq:XP_015633686.1	SEG:seg	:

Description

PLASMA MEMBRANE INTRINSIC PROTEIN 2;3Major intrinsic protein family protein. (Os04t0521100-01)

Coordinates

chr4:+:26099273..26101764

Molecular Weight (calculated)

30417.8 Da

IEP (calculated)

8.079

GRAVY (calculated)

0.509

Length

290 amino acids

Sequence
(BLAST)

001: MAKDIEAAAA AEGGEYMAKD YSDPPPAPLI DAEELTKWSL YRAVIAEFVA TLLFLYITVA TVIGYKHQSD PGANAADAAC SGVGILGIAW AFGGMIFILV
101: YCTAGVSGGH INPAVTFGLF LARKVSLVRA VLYIVAQSLG AICGVGLVKG FQSAFYVRYG GGANELSDGY SKGTGLAAEI IGTFVLVYTV FSATDPKRNA
201: RDSHVPVLAP LPIGFAVFMV HLATIPITGT GINPARSLGA AVIYNQHKAW HDHWIFWVGP LIGAAIAAAY HQYVLRASAA KLGSSSSFRG

Best Arabidopsis Sequence Match ( AT2G37170.2 )
(BLAST)

001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV

Arabidopsis Description

PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.