Factsheet for Os07t0448100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 29651780

gfp PMID: 29651780 doi

TTH Chu, TG Hoang, DC Trinh, C Bureau, D Meynard, A Vernet, M Ingouff, NV Do, C Périn, E Guiderdoni, P Gantet, C Maurel, DT Luu

BPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France., BPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France. luu@supagro.fr., CIRAD, UMR AGAP, 34398, Montpellier, France., IRD, LMI RICE, Agricultural Genetics Institute, Pham Van Dong road, Co Nhue, Tuliem, Hanoï, Vietnam., National key laboratory for Plant Cell Biotechnology, Agricultural Genetics Institute, Pham Van Dong, Co Nhue, Tuliem, Hanoi, Vietnam., University of Science and Technology of Hanoi, LMI RICE, 18 Hoang Quoc Viet, Nghia Do, Cau Giay, Hanoi, Vietnam., Université de Montpellier, CIRAD-INRA-Montpellier SupAgro, 34000, Montpellier, France., Université de Montpellier, UMR DIADE, 911 Avenue Agropolis, 34394, Montpellier Cedex 5, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98453	Sorghum	plasma membrane	92.31	92.31
Zm00001d005410_P001	Maize	plasma membrane	91.96	91.96
EER98452	Sorghum	plasma membrane	91.61	91.61
EER98457	Sorghum	plasma membrane	91.61	91.61
Zm00001d019565_P001	Maize	plasma membrane	91.61	90.97
EER98454	Sorghum	plasma membrane	90.91	90.91
TraesCS5A01G100000.1	Wheat	plasma membrane	89.51	89.51
TraesCS5D01G112500.1	Wheat	plasma membrane	89.16	89.16
Os07t0448400-01	Rice	plasma membrane	40.91	86.67
Os07t0448800-01	Rice	plasma membrane	82.87	81.72
Os02t0629200-02	Rice	plasma membrane	82.17	81.6
Os04t0521100-01	Rice	plasma membrane	81.47	80.34
Os07t0448200-00	Rice	mitochondrion, nucleus, plastid	74.13	76.53
Os04t0233400-01	Rice	plasma membrane	74.13	75.18
HORVU5Hr1G027240.4	Barley	plasma membrane	80.07	72.01
HORVU0Hr1G011280.5	Barley	cytosol	65.73	71.76
HORVU5Hr1G029550.2	Barley	plasma membrane	79.72	71.7
Os09t0541000-01	Rice	cytosol, plasma membrane, vacuole	67.48	66.55
OQU88961	Sorghum	plastid	86.71	66.31
Os04t0559700-01	Rice	plasma membrane	66.43	65.97
Os03t0861300-01	Rice	cytosol, peroxisome, plasma membrane	64.34	65.71
Os02t0666200-01	Rice	plasma membrane	65.73	65.05
Os10t0481100-01	Rice	plasma membrane	20.28	62.37
Os02t0658100-01	Rice	vacuole	26.57	36.89
Os06t0336200-01	Rice	nucleus	31.12	35.89
Os03t0146100-01	Rice	nucleus	30.42	34.8
Os01t0232000-00	Rice	cytosol, endoplasmic reticulum, plasma membrane	30.07	34.26
Os04t0550900-00	Rice	endoplasmic reticulum, extracellular, vacuole	16.78	33.8
Os10t0492600-01	Rice	plastid	29.72	32.2
Os01t0232100-01	Rice	cytosol, endoplasmic reticulum, extracellular	27.97	31.25
Os04t0527900-01	Rice	plastid	28.32	30.57
Os04t0550800-01	Rice	endoplasmic reticulum, plasma membrane	27.97	29.74
Os05t0231700-01	Rice	golgi, mitochondrion, plasma membrane	27.27	24.84

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	EntrezGene:4343119	EMBL:AK072632	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
ProteinID:BAC15860.1	ProteinID:BAC16113.1	ProteinID:BAF21456.1	ProteinID:BAT01301.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	EnsemblPlantsGene:Os07g0448100	EnsemblPlants:Os07t0448100-01
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF133	UniProt:Q8GRT8
SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00000AE55B	RefSeq:XP_015644586.1	:

Description

PLASMA MEMBRANE INTRINSIC PROTEIN 2;4Similar to Plasma membrane integral protein ZmPIP2-6. (Os07t0448100-01)

Coordinates

chr7:+:15358960..15360391

Molecular Weight (calculated)

29937.4 Da

IEP (calculated)

7.954

GRAVY (calculated)

0.580

Length

286 amino acids

Sequence
(BLAST)

001: MGKEVDVSTL EAGGARDYID PPPAPLVDVD ELGKWSLYRA LIAEFVATLL FLYVTVATVI GYKHQTDAAV NGADAACGGV GVLGIAWAFG GMIFILVYCT
101: AGVSGGHINP AVTLGLFLAR KVSLVRALLY MAAQCLGAIC GVALVKGFQS SLYDRYGGGA NELAAGYSTG TGLAAEIIGT FVLVYTVFSA TDPKRNARDS
201: HVPVLAPLPI GFAVFMVHLA TIPITGTGIN PARSLGVAVV YNNNKAWSDQ WIFWVGPFIG AAIAALYHQV ILRASARGYG SFRSNA

Best Arabidopsis Sequence Match ( AT2G37170.2 )
(BLAST)

001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV

Arabidopsis Description

PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.