Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
29651780
|
plasma membrane:
27800704
|
gfp PMID:
29651780
doi
BPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France., BPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France. luu@supagro.fr., CIRAD, UMR AGAP, 34398, Montpellier, France., IRD, LMI RICE, Agricultural Genetics Institute, Pham Van Dong road, Co Nhue, Tuliem, Hanoï, Vietnam., National key laboratory for Plant Cell Biotechnology, Agricultural Genetics Institute, Pham Van Dong, Co Nhue, Tuliem, Hanoi, Vietnam., University of Science and Technology of Hanoi, LMI RICE, 18 Hoang Quoc Viet, Nghia Do, Cau Giay, Hanoi, Vietnam., Université de Montpellier, CIRAD-INRA-Montpellier SupAgro, 34000, Montpellier, France., Université de Montpellier, UMR DIADE, 911 Avenue Agropolis, 34394, Montpellier Cedex 5, France.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0448200-00 | Rice | mitochondrion, nucleus, plastid | 85.93 | 41.88 |
| Os07t0448100-01 | Rice | plasma membrane | 86.67 | 40.91 |
| Os02t0629200-02 | Rice | plasma membrane | 78.52 | 36.81 |
| Os04t0521100-01 | Rice | plasma membrane | 78.52 | 36.55 |
| Os07t0448800-01 | Rice | plasma membrane | 78.52 | 36.55 |
| Os04t0233400-01 | Rice | plasma membrane | 74.81 | 35.82 |
| Os09t0541000-01 | Rice | cytosol, plasma membrane, vacuole | 68.15 | 31.72 |
| Os04t0559700-01 | Rice | plasma membrane | 67.41 | 31.6 |
| Os03t0861300-01 | Rice | cytosol, peroxisome, plasma membrane | 64.44 | 31.07 |
| Os02t0666200-01 | Rice | plasma membrane | 65.93 | 30.8 |
| Os02t0658100-01 | Rice | vacuole | 30.37 | 19.9 |
| Os06t0336200-01 | Rice | nucleus | 31.85 | 17.34 |
| Os03t0146100-01 | Rice | nucleus | 30.37 | 16.4 |
| Os01t0232000-00 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 28.89 | 15.54 |
| Os10t0492600-01 | Rice | plastid | 30.37 | 15.53 |
| Os04t0550800-01 | Rice | endoplasmic reticulum, plasma membrane | 30.37 | 15.24 |
| Os04t0527900-01 | Rice | plastid | 28.15 | 14.34 |
| Os01t0232100-01 | Rice | cytosol, endoplasmic reticulum, extracellular | 26.67 | 14.06 |
| Os05t0231700-01 | Rice | golgi, mitochondrion, plasma membrane | 26.67 | 11.46 |
| Os10t0481100-01 | Rice | plasma membrane | 3.7 | 5.38 |
| Os04t0550900-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 2.96 | 2.82 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | ProteinID:BAF21458.1 | ProteinID:BAT01304.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP | EnsemblPlantsGene:Os07g0448400 |
| EnsemblPlants:Os07t0448400-01 | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF261 | UniProt:Q0D6R5 |
| SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0000E12ADC | : | : | : |
Description
PLASMA MEMBRANE INTRINSIC PROTEIN 2;5Similar to Aquaporin PIP2-5. (Os07t0448400-01)
Coordinates
chr7:+:15376916..15378289
Molecular Weight (calculated)
14643.7 Da
IEP (calculated)
11.445
GRAVY (calculated)
0.304
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: TQTLATPKHF RFLLSSVRRA NQASEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPVTGTGINP ARSLGAAVVY NNSKAWSDQW
101: IFWVGPFIGA AIAALYHQIV LRASARGYGS FRSNA
101: IFWVGPFIGA AIAALYHQIV LRASARGYGS FRSNA
001: MAKDVEGPEG FQTRDYEDPP PTPFFDADEL TKWSLYRAVI AEFVATLLFL YITVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.