Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G027240.4 | Barley | plasma membrane | 99.69 | 99.69 |
| TraesCS5A01G100000.1 | Wheat | plasma membrane | 79.56 | 88.46 |
| TraesCS5D01G112500.1 | Wheat | plasma membrane | 79.25 | 88.11 |
| Zm00001d005410_P001 | Maize | plasma membrane | 74.21 | 82.52 |
| Zm00001d019565_P001 | Maize | plasma membrane | 73.27 | 80.9 |
| EER98453 | Sorghum | plasma membrane | 72.64 | 80.77 |
| EER98452 | Sorghum | plasma membrane | 72.64 | 80.77 |
| EER98454 | Sorghum | plasma membrane | 72.64 | 80.77 |
| EER98457 | Sorghum | plasma membrane | 72.33 | 80.42 |
| Os07t0448100-01 | Rice | plasma membrane | 71.7 | 79.72 |
| HORVU2Hr1G089940.3 | Barley | plasma membrane | 66.98 | 73.45 |
| HORVU6Hr1G058930.20 | Barley | golgi, plasma membrane | 64.47 | 70.93 |
| HORVU0Hr1G011280.5 | Barley | cytosol | 58.18 | 70.61 |
| Os07t0448200-00 | Rice | mitochondrion, nucleus, plastid | 56.29 | 64.62 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 67.61 | 63.05 |
| HORVU5Hr1G125600.1 | Barley | golgi, peroxisome, plasma membrane | 56.6 | 61.86 |
| HORVU0Hr1G014490.7 | Barley | plastid | 57.55 | 61.62 |
| HORVU6Hr1G064140.1 | Barley | golgi, peroxisome, plasma membrane | 55.66 | 61.03 |
| OQU88961 | Sorghum | plastid | 69.18 | 58.82 |
| HORVU2Hr1G010990.2 | Barley | plasma membrane | 58.8 | 58.8 |
| HORVU6Hr1G014300.1 | Barley | cytosol, golgi, peroxisome | 53.14 | 57.88 |
| HORVU2Hr1G089970.3 | Barley | endoplasmic reticulum, extracellular | 15.41 | 57.65 |
| HORVU5Hr1G084230.1 | Barley | extracellular, golgi, mitochondrion | 56.29 | 57.56 |
| HORVU5Hr1G055200.4 | Barley | golgi, plastid | 55.03 | 56.27 |
| HORVU2Hr1G089820.6 | Barley | golgi | 43.08 | 47.9 |
| HORVU7Hr1G038940.1 | Barley | golgi | 29.25 | 45.59 |
| HORVU0Hr1G032130.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 27.99 | 35.74 |
| HORVU6Hr1G062980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 27.99 | 35.74 |
| HORVU7Hr1G081770.8 | Barley | plasma membrane | 26.42 | 33.73 |
| HORVU3Hr1G116790.2 | Barley | vacuole | 26.42 | 33.33 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 26.1 | 33.2 |
| HORVU1Hr1G043890.2 | Barley | mitochondrion | 24.84 | 30.04 |
| HORVU3Hr1G031620.5 | Barley | nucleus, peroxisome, plastid | 23.27 | 23.27 |
| HORVU4Hr1G085250.2 | Barley | plastid | 21.38 | 22.59 |
| HORVU3Hr1G031680.1 | Barley | vacuole | 15.72 | 18.66 |
| HORVU2Hr1G097780.15 | Barley | golgi, mitochondrion, plastid | 15.41 | 18.22 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | UniProt:A0A287QSN3 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU5Hr1G029550 | EnsemblPlants:HORVU5Hr1G029550.2 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF133 |
| SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI000B47493A | SEG:seg | : |
Description
No Description!
Coordinates
chrchr5H:-:178168368..178169463
Molecular Weight (calculated)
33193.2 Da
IEP (calculated)
6.504
GRAVY (calculated)
0.397
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKEVDVSAL EAGGARDYSD PPPAPLVDVD ELGRWSLYRA VIAEFVATLL FLYITVSTVI AYKHQTDASA SGPDAACGGV GVLGIAWAFG GMIFVLVYCT
101: AGISGGHINP AVTFGLFLAR RVSLVRALLY MAAQCLGAVC GVGLVRGFQS GLYARHGGGA NEVGAGYSVG TGLAAEIVGT FVLVYTVFSA TDSKRNARDS
201: HVPMLAPLPI GFAVFMVHLA TIPITGTGIN PARSLGAAVI YNGDKAWSDQ VNLPELTSAL LPELTSALLL ICDAVDLLGG AVHRRGDRSA LPPDHPPRER
301: QGLWLLPEQR LASSPSHP
101: AGISGGHINP AVTFGLFLAR RVSLVRALLY MAAQCLGAVC GVGLVRGFQS GLYARHGGGA NEVGAGYSVG TGLAAEIVGT FVLVYTVFSA TDSKRNARDS
201: HVPMLAPLPI GFAVFMVHLA TIPITGTGIN PARSLGAAVI YNGDKAWSDQ VNLPELTSAL LPELTSALLL ICDAVDLLGG AVHRRGDRSA LPPDHPPRER
301: QGLWLLPEQR LASSPSHP
001: MAKDVEGPEG FQTRDYEDPP PTPFFDADEL TKWSLYRAVI AEFVATLLFL YITVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.