Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G089940.3 | Barley | plasma membrane | 60.49 | 59.66 |
| HORVU6Hr1G058930.20 | Barley | golgi, plasma membrane | 54.9 | 54.33 |
| HORVU7Hr1G038940.1 | Barley | golgi | 33.57 | 47.06 |
| HORVU5Hr1G125600.1 | Barley | golgi, peroxisome, plasma membrane | 45.1 | 44.33 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 52.8 | 44.28 |
| HORVU5Hr1G027240.4 | Barley | plasma membrane | 48.25 | 43.4 |
| HORVU5Hr1G029550.2 | Barley | plasma membrane | 47.9 | 43.08 |
| HORVU0Hr1G014490.7 | Barley | plastid | 44.41 | 42.76 |
| HORVU0Hr1G011280.5 | Barley | cytosol | 38.81 | 42.37 |
| HORVU6Hr1G014300.1 | Barley | cytosol, golgi, peroxisome | 42.31 | 41.44 |
| HORVU6Hr1G064140.1 | Barley | golgi, peroxisome, plasma membrane | 40.91 | 40.34 |
| HORVU2Hr1G010990.2 | Barley | plasma membrane | 44.41 | 39.94 |
| HORVU5Hr1G084230.1 | Barley | extracellular, golgi, mitochondrion | 42.66 | 39.23 |
| HORVU5Hr1G055200.4 | Barley | golgi, plastid | 42.31 | 38.91 |
| HORVU6Hr1G062980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 20.98 | 24.1 |
| HORVU0Hr1G032130.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 20.98 | 24.1 |
| HORVU3Hr1G116790.2 | Barley | vacuole | 20.98 | 23.81 |
| HORVU7Hr1G081770.8 | Barley | plasma membrane | 19.23 | 22.09 |
| HORVU1Hr1G043890.2 | Barley | mitochondrion | 20.28 | 22.05 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 18.88 | 21.6 |
| HORVU3Hr1G031620.5 | Barley | nucleus, peroxisome, plastid | 19.93 | 17.92 |
| HORVU2Hr1G089970.3 | Barley | endoplasmic reticulum, extracellular | 5.24 | 17.65 |
| HORVU4Hr1G085250.2 | Barley | plastid | 18.18 | 17.28 |
| HORVU3Hr1G031680.1 | Barley | vacuole | 14.34 | 15.3 |
| HORVU2Hr1G097780.15 | Barley | golgi, mitochondrion, plastid | 13.99 | 14.87 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| EnsemblPlantsGene:HORVU2Hr1G089820 | EnsemblPlants:HORVU2Hr1G089820.6 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF167 | SUPFAM:SSF81338 | TMHMM:TMhelix |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:640711771..640713926
Molecular Weight (calculated)
25375.9 Da
IEP (calculated)
8.345
GRAVY (calculated)
0.379
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDIEAAPP GGEYAAKDYS DPPPAPLFDA EELTKWSLYR AVIAEFVATL LFLYITVATV IGYKHQADPA GPNAADAACS GVGILGIAWX XXXXXXXXVY
101: CTAGVSGGHI NPAVTFGLFL ARKVSLVRAV LYIIAQCLGA ICGVGLVKGF QSAFYVRYGG GANELSAGYS KGXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXVDRVI LLLLFSACQV FIPMTGQNLG QRSLREPTSQ GVAGPPGRAM SAFGVPGGPL PSFSGSPILF CSGKNIFGSF IPFGLR
101: CTAGVSGGHI NPAVTFGLFL ARKVSLVRAV LYIIAQCLGA ICGVGLVKGF QSAFYVRYGG GANELSAGYS KGXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXVDRVI LLLLFSACQV FIPMTGQNLG QRSLREPTSQ GVAGPPGRAM SAFGVPGGPL PSFSGSPILF CSGKNIFGSF IPFGLR
001: MAKDVEGPEG FQTRDYEDPP PTPFFDADEL TKWSLYRAVI AEFVATLLFL YITVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.