Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G089970.3 | Barley | endoplasmic reticulum, extracellular | 24.81 | 76.47 |
| TraesCS5A01G100000.1 | Wheat | plasma membrane | 79.39 | 72.73 |
| TraesCS5D01G112500.1 | Wheat | plasma membrane | 79.01 | 72.38 |
| Zm00001d005410_P001 | Maize | plasma membrane | 72.9 | 66.78 |
| EER98452 | Sorghum | plasma membrane | 72.14 | 66.08 |
| EER98453 | Sorghum | plasma membrane | 71.76 | 65.73 |
| Os07t0448100-01 | Rice | plasma membrane | 71.76 | 65.73 |
| Zm00001d019565_P001 | Maize | plasma membrane | 72.14 | 65.62 |
| EER98457 | Sorghum | plasma membrane | 71.37 | 65.38 |
| EER98454 | Sorghum | plasma membrane | 70.99 | 65.03 |
| Os07t0448200-00 | Rice | mitochondrion, nucleus, plastid | 65.65 | 62.09 |
| HORVU2Hr1G089940.3 | Barley | plasma membrane | 66.79 | 60.34 |
| HORVU5Hr1G029550.2 | Barley | plasma membrane | 70.61 | 58.18 |
| HORVU5Hr1G027240.4 | Barley | plasma membrane | 70.61 | 58.18 |
| HORVU6Hr1G058930.20 | Barley | golgi, plasma membrane | 58.78 | 53.29 |
| HORVU5Hr1G125600.1 | Barley | golgi, peroxisome, plasma membrane | 59.16 | 53.26 |
| HORVU6Hr1G064140.1 | Barley | golgi, peroxisome, plasma membrane | 58.78 | 53.1 |
| HORVU0Hr1G014490.7 | Barley | plastid | 59.92 | 52.86 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 67.94 | 52.2 |
| HORVU6Hr1G014300.1 | Barley | cytosol, golgi, peroxisome | 54.96 | 49.32 |
| OQU88961 | Sorghum | plastid | 70.23 | 49.2 |
| HORVU5Hr1G055200.4 | Barley | golgi, plastid | 57.25 | 48.23 |
| HORVU5Hr1G084230.1 | Barley | extracellular, golgi, mitochondrion | 57.25 | 48.23 |
| HORVU2Hr1G010990.2 | Barley | plasma membrane | 51.91 | 42.77 |
| HORVU2Hr1G089820.6 | Barley | golgi | 42.37 | 38.81 |
| HORVU3Hr1G116790.2 | Barley | vacuole | 29.77 | 30.95 |
| HORVU7Hr1G038940.1 | Barley | golgi | 24.05 | 30.88 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 26.72 | 28.0 |
| HORVU6Hr1G062980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 26.34 | 27.71 |
| HORVU7Hr1G081770.8 | Barley | plasma membrane | 26.34 | 27.71 |
| HORVU0Hr1G032130.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 26.34 | 27.71 |
| HORVU1Hr1G043890.2 | Barley | mitochondrion | 26.34 | 26.24 |
| HORVU3Hr1G031620.5 | Barley | nucleus, peroxisome, plastid | 25.19 | 20.75 |
| HORVU4Hr1G085250.2 | Barley | plastid | 22.14 | 19.27 |
| HORVU3Hr1G031680.1 | Barley | vacuole | 15.27 | 14.93 |
| HORVU2Hr1G097780.15 | Barley | golgi, mitochondrion, plastid | 14.12 | 13.75 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | UniProt:A0A287DZL2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU0Hr1G011280 | EnsemblPlants:HORVU0Hr1G011280.5 | InterPro:IPR023271 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF133 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI000B47052B | SEG:seg | : |
Description
No Description!
Coordinates
chrchrUn:-:63913657..63914707
Molecular Weight (calculated)
22281.9 Da
IEP (calculated)
9.341
GRAVY (calculated)
0.328
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: GGARDYSDPP PAPLVDVDEL GRWSPYRAVI AXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXT AGISGGHINP AVTFGLFLAR
101: RVSLVRALLY MAAQCLGAVC GVGLVRGFQS GLYARHGGGA NEVGAGYSVG TGLAAEIVGT FVLVYTVFSA TDSKRNARDP TNPVLAPLPI GFAVFMVHLA
201: TIPITGTGIN PARSLGAAVI YNGDKAWSDQ WIFWVGPFIG AAIAALYHQT ILRASARGYG SF
101: RVSLVRALLY MAAQCLGAVC GVGLVRGFQS GLYARHGGGA NEVGAGYSVG TGLAAEIVGT FVLVYTVFSA TDSKRNARDP TNPVLAPLPI GFAVFMVHLA
201: TIPITGTGIN PARSLGAAVI YNGDKAWSDQ WIFWVGPFIG AAIAALYHQT ILRASARGYG SF
001: MSKEVSEEGR HGKDYVDPPP APLLDMAELK LWSFYRAIIA EFIATLLFLY VTVATVIGHK NQTGPCGGVG LLGIAWAFGG MIFVLVYCTA GISGGHINPA
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN
Arabidopsis Description
PIP2-8Probable aquaporin PIP2-8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.