Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 3
- golgi 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
vacuole:
19391183
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G540900.1 | Wheat | plasma membrane | 98.81 | 98.81 |
| TraesCS3A01G535300.1 | Wheat | plasma membrane | 98.81 | 98.81 |
| TraesCS3B01G608500.1 | Wheat | plasma membrane | 98.41 | 98.41 |
| Zm00001d011778_P001 | Maize | plasma membrane | 90.48 | 89.76 |
| EES04303 | Sorghum | cytosol | 89.68 | 87.6 |
| Solyc06g075650.2.1 | Tomato | endoplasmic reticulum | 81.35 | 81.03 |
| PGSC0003DMT400077927 | Potato | cytosol, plasma membrane, plastid, vacuole | 80.95 | 80.63 |
| GSMUA_Achr10P... | Banana | plasma membrane | 80.16 | 80.16 |
| KRH23017 | Soybean | cytosol, plasma membrane, vacuole | 77.78 | 77.78 |
| KRH24847 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 74.21 | 76.33 |
| KRH29856 | Soybean | cytosol, plasma membrane, vacuole | 76.19 | 76.19 |
| GSMUA_Achr6P15380_001 | Banana | cytosol, plasma membrane, vacuole | 74.6 | 74.6 |
| KRH10300 | Soybean | endoplasmic reticulum, extracellular | 47.22 | 74.38 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 70.63 | 71.2 |
| VIT_06s0004g04120.t01 | Wine grape | cytosol, plasma membrane, vacuole | 75.4 | 70.9 |
| HORVU0Hr1G032130.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 57.14 | 57.83 |
| HORVU6Hr1G062980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 57.14 | 57.83 |
| HORVU7Hr1G081770.8 | Barley | plasma membrane | 54.37 | 55.02 |
| HORVU1Hr1G043890.2 | Barley | mitochondrion | 55.95 | 53.61 |
| HORVU3Hr1G031620.5 | Barley | nucleus, peroxisome, plastid | 46.43 | 36.79 |
| HORVU4Hr1G085250.2 | Barley | plastid | 42.46 | 35.55 |
| HORVU2Hr1G089970.3 | Barley | endoplasmic reticulum, extracellular | 11.51 | 34.12 |
| HORVU2Hr1G089940.3 | Barley | plasma membrane | 37.3 | 32.41 |
| HORVU0Hr1G014490.7 | Barley | plastid | 36.11 | 30.64 |
| HORVU5Hr1G125600.1 | Barley | golgi, peroxisome, plasma membrane | 34.52 | 29.9 |
| HORVU0Hr1G011280.5 | Barley | cytosol | 30.95 | 29.77 |
| HORVU5Hr1G084230.1 | Barley | extracellular, golgi, mitochondrion | 36.11 | 29.26 |
| HORVU6Hr1G064140.1 | Barley | golgi, peroxisome, plasma membrane | 33.33 | 28.97 |
| HORVU6Hr1G014300.1 | Barley | cytosol, golgi, peroxisome | 32.94 | 28.42 |
| HORVU6Hr1G058930.20 | Barley | golgi, plasma membrane | 32.14 | 28.03 |
| HORVU5Hr1G055200.4 | Barley | golgi, plastid | 34.13 | 27.65 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 37.3 | 27.57 |
| HORVU2Hr1G097780.15 | Barley | golgi, mitochondrion, plastid | 28.97 | 27.14 |
| HORVU2Hr1G010990.2 | Barley | plasma membrane | 33.73 | 26.73 |
| HORVU5Hr1G029550.2 | Barley | plasma membrane | 33.33 | 26.42 |
| HORVU5Hr1G027240.4 | Barley | plasma membrane | 32.94 | 26.1 |
| HORVU3Hr1G031680.1 | Barley | vacuole | 27.38 | 25.75 |
| HORVU7Hr1G038940.1 | Barley | golgi | 17.46 | 21.57 |
| HORVU2Hr1G089820.6 | Barley | golgi | 23.81 | 20.98 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EMBL:AB540226 | EMBL:AK355942 | EMBL:AK372282 | InterPro:Aquaporin-like |
| InterPro:Aquaporin_transptr | UniProt:D2KZ43 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU3Hr1G116790 |
| EnsemblPlants:HORVU3Hr1G116790.2 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 |
| ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF55 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0001B355A6 |
| SEG:seg | : | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:D2KZ43]
Coordinates
chrchr3H:+:696450998..696453343
Molecular Weight (calculated)
25518.1 Da
IEP (calculated)
5.484
GRAVY (calculated)
0.899
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVSRIAIGA PGELSHPDTF RAGVAEFISM LIFVFAGSGS GMAFGKLTDG GAATPAGLIS AALAHAFALF VAVSVGANIS GGHVNPAVTF GAFVGGNISL
101: LKAVVYWVAQ LLGSVVACLL LKIATGGEAV GAFSLSAGVG VWNAVVFEIV MTFGLVYTVY ATAVDPKRGD LGVIAPIAIG FIVGANILAG GAFDGASMNP
201: AVSFGPAVVS GVWENHWVYW LGPFAGAAIA ALVYDICFIG QRPHEQLPTA EY
101: LKAVVYWVAQ LLGSVVACLL LKIATGGEAV GAFSLSAGVG VWNAVVFEIV MTFGLVYTVY ATAVDPKRGD LGVIAPIAIG FIVGANILAG GAFDGASMNP
201: AVSFGPAVVS GVWENHWVYW LGPFAGAAIA ALVYDICFIG QRPHEQLPTA EY
001: MPINRIAIGT PGEASRPDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPAGLVA ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF
Arabidopsis Description
TIP1-3Aquaporin TIP1-3 [Source:UniProtKB/Swiss-Prot;Acc:O82598]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.