Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G540900.1 | Wheat | plasma membrane | 99.6 | 99.6 |
| TraesCS3A01G535300.1 | Wheat | plasma membrane | 99.6 | 99.6 |
| HORVU3Hr1G116790.2 | Barley | vacuole | 98.41 | 98.41 |
| Zm00001d011778_P001 | Maize | plasma membrane | 92.06 | 91.34 |
| EES04303 | Sorghum | cytosol | 90.08 | 87.98 |
| GSMUA_Achr10P... | Banana | plasma membrane | 80.95 | 80.95 |
| Solyc06g075650.2.1 | Tomato | endoplasmic reticulum | 80.56 | 80.24 |
| PGSC0003DMT400077927 | Potato | cytosol, plasma membrane, plastid, vacuole | 80.16 | 79.84 |
| KRH23017 | Soybean | cytosol, plasma membrane, vacuole | 77.78 | 77.78 |
| KRH24847 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 74.21 | 76.33 |
| KRH29856 | Soybean | cytosol, plasma membrane, vacuole | 76.19 | 76.19 |
| KRH10300 | Soybean | endoplasmic reticulum, extracellular | 47.62 | 75.0 |
| GSMUA_Achr6P15380_001 | Banana | cytosol, plasma membrane, vacuole | 74.6 | 74.6 |
| VIT_06s0004g04120.t01 | Wine grape | cytosol, plasma membrane, vacuole | 75.79 | 71.27 |
| TraesCS4B01G310900.1 | Wheat | unclear | 69.84 | 70.4 |
| TraesCS6B01G275100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 57.54 | 58.23 |
| TraesCS2B01G433200.1 | Wheat | plasma membrane | 56.75 | 57.66 |
| TraesCS7B01G243000.1 | Wheat | plasma membrane | 55.16 | 56.05 |
| TraesCS1B01G182200.1 | Wheat | golgi | 55.95 | 53.61 |
| TraesCS3B01G182200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.21 | 49.4 |
| TraesCS2B01G391400.1 | Wheat | extracellular, plasma membrane, vacuole | 49.6 | 47.17 |
| TraesCS3B01G182400.1 | Wheat | plasma membrane | 45.63 | 46.37 |
| TraesCS4B01G349500.1 | Wheat | plasma membrane | 42.46 | 41.96 |
| TraesCS2B01G433300.1 | Wheat | endoplasmic reticulum | 38.1 | 38.71 |
| TraesCS6B01G398000.1 | Wheat | extracellular | 17.86 | 35.16 |
| TraesCS5B01G570800.1 | Wheat | golgi, peroxisome, plasma membrane | 36.51 | 32.62 |
| TraesCS2B01G225900.1 | Wheat | golgi | 36.9 | 32.07 |
| TraesCS2B01G077700.1 | Wheat | plasma membrane | 36.11 | 32.04 |
| TraesCS7B01G002000.1 | Wheat | golgi, peroxisome, plasma membrane | 35.71 | 31.69 |
| TraesCS2B01G396800.1 | Wheat | golgi | 36.11 | 31.38 |
| TraesCS5B01G332500.1 | Wheat | plasma membrane | 35.71 | 30.93 |
| TraesCS2B01G396700.2 | Wheat | plasma membrane | 36.11 | 30.85 |
| TraesCS6B01G259000.1 | Wheat | golgi, peroxisome, plasma membrane | 34.92 | 30.77 |
| TraesCS5B01G567600.1 | Wheat | golgi, peroxisome, plasma membrane | 35.32 | 30.58 |
| TraesCS7B01G003900.1 | Wheat | golgi, peroxisome, plasma membrane | 35.32 | 30.58 |
| TraesCS5B01G567500.1 | Wheat | golgi, peroxisome, plasma membrane | 34.92 | 30.45 |
| TraesCS7B01G003800.1 | Wheat | golgi, peroxisome, plasma membrane | 34.52 | 30.1 |
| TraesCS6B01G450000.1 | Wheat | unclear | 34.13 | 29.45 |
| TraesCS5B01G178700.1 | Wheat | plasma membrane | 34.13 | 29.45 |
| TraesCS2B01G605900.1 | Wheat | golgi, peroxisome, plasma membrane | 33.73 | 29.41 |
| TraesCS6B01G279200.1 | Wheat | plastid | 33.73 | 29.31 |
| TraesCS2B01G425600.1 | Wheat | golgi, plasma membrane | 33.33 | 29.17 |
| TraesCS6B01G450200.1 | Wheat | plastid | 33.73 | 29.11 |
| TraesCS6B01G114400.1 | Wheat | golgi, peroxisome, plasma membrane | 33.73 | 28.81 |
| TraesCS4B01G362300.1 | Wheat | golgi, peroxisome, plasma membrane | 32.94 | 28.42 |
| TraesCS7B01G096000.1 | Wheat | golgi, peroxisome, plasma membrane | 31.75 | 26.32 |
| TraesCS4B01G027600.1 | Wheat | plasma membrane | 26.59 | 23.02 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF55 | SUPFAM:SSF81338 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G608500 | EnsemblPlants:TraesCS3B01G608500.1 |
| TIGR:cd00333 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:826725085..826725945
Molecular Weight (calculated)
25532.1 Da
IEP (calculated)
5.477
GRAVY (calculated)
0.900
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVSRIAIGA PGELSHPDTF RAGVAEFISM LIFVFAGSGS GMAFGKLTDG GATTPAGLIA AALAHAFALF VAVSVGANIS GGHVNPAVTF GAFVGGNISL
101: LKAVVYWVAQ LLGSVVACLL LKIATGGEAV GAFSLSAGVG VWNAVVFEIV MTFGLVYTVY ATAVDPKRGD LGVIAPIAIG FIVGANILAG GAFDGASMNP
201: AVSFGPAVVT GVWENHWVYW LGPFAGAAIA ALVYDICFIG QRPHEQLPTA DY
101: LKAVVYWVAQ LLGSVVACLL LKIATGGEAV GAFSLSAGVG VWNAVVFEIV MTFGLVYTVY ATAVDPKRGD LGVIAPIAIG FIVGANILAG GAFDGASMNP
201: AVSFGPAVVT GVWENHWVYW LGPFAGAAIA ALVYDICFIG QRPHEQLPTA DY
001: MPINRIAIGT PGEASRPDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPAGLVA ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF
Arabidopsis Description
TIP1-3Aquaporin TIP1-3 [Source:UniProtKB/Swiss-Prot;Acc:O82598]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.