Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G355600.1 | Wheat | golgi, peroxisome, plasma membrane | 97.6 | 97.6 |
| TraesCS5A01G530600.1 | Wheat | golgi, peroxisome, plasma membrane | 95.55 | 95.55 |
| TraesCS7B01G003800.1 | Wheat | golgi, peroxisome, plasma membrane | 81.85 | 82.7 |
| TraesCS5B01G567500.1 | Wheat | golgi, peroxisome, plasma membrane | 81.51 | 82.35 |
| TraesCS7B01G003900.1 | Wheat | golgi, peroxisome, plasma membrane | 81.85 | 82.13 |
| TraesCS5B01G567600.1 | Wheat | golgi, peroxisome, plasma membrane | 80.48 | 80.76 |
| TraesCS6B01G114400.1 | Wheat | golgi, peroxisome, plasma membrane | 79.45 | 78.64 |
| TraesCS5B01G570800.1 | Wheat | golgi, peroxisome, plasma membrane | 72.6 | 75.18 |
| TraesCS7B01G002000.1 | Wheat | golgi, peroxisome, plasma membrane | 71.92 | 73.94 |
| OQU91911 | Sorghum | plasma membrane | 70.21 | 72.69 |
| Zm00001d014285_P001 | Maize | plasma membrane | 68.84 | 71.02 |
| TraesCS2B01G225900.1 | Wheat | golgi | 69.86 | 70.34 |
| TraesCS6B01G259000.1 | Wheat | golgi, peroxisome, plasma membrane | 68.49 | 69.93 |
| TraesCS2B01G077700.1 | Wheat | plasma membrane | 66.78 | 68.66 |
| TraesCS2B01G396800.1 | Wheat | golgi | 68.15 | 68.62 |
| Os03t0861300-01 | Rice | cytosol, peroxisome, plasma membrane | 65.75 | 68.57 |
| TraesCS6B01G398000.1 | Wheat | extracellular | 29.45 | 67.19 |
| TraesCS2B01G396700.2 | Wheat | plasma membrane | 67.81 | 67.12 |
| TraesCS5B01G332500.1 | Wheat | plasma membrane | 62.67 | 62.89 |
| TraesCS6B01G450200.1 | Wheat | plastid | 59.93 | 59.93 |
| TraesCS2B01G425600.1 | Wheat | golgi, plasma membrane | 58.56 | 59.38 |
| TraesCS5B01G178700.1 | Wheat | plasma membrane | 59.25 | 59.25 |
| TraesCS6B01G450000.1 | Wheat | unclear | 59.25 | 59.25 |
| TraesCS6B01G279200.1 | Wheat | plastid | 58.56 | 58.97 |
| TraesCS2B01G605900.1 | Wheat | golgi, peroxisome, plasma membrane | 57.53 | 58.13 |
| TraesCS7B01G096000.1 | Wheat | golgi, peroxisome, plasma membrane | 54.45 | 52.3 |
| TraesCS4B01G027600.1 | Wheat | plasma membrane | 50.34 | 50.52 |
| TraesCS6B01G275100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.48 | 35.74 |
| TraesCS2B01G433200.1 | Wheat | plasma membrane | 30.14 | 35.48 |
| TraesCS7B01G243000.1 | Wheat | plasma membrane | 29.45 | 34.68 |
| TraesCS4B01G310900.1 | Wheat | unclear | 28.77 | 33.6 |
| TraesCS2B01G391400.1 | Wheat | extracellular, plasma membrane, vacuole | 30.48 | 33.58 |
| TraesCS3B01G182200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.42 | 33.07 |
| TraesCS3B01G608500.1 | Wheat | plasma membrane | 28.42 | 32.94 |
| TraesCS1B01G182200.1 | Wheat | golgi | 29.11 | 32.32 |
| TraesCS3B01G182400.1 | Wheat | plasma membrane | 25.68 | 30.24 |
| TraesCS2B01G433300.1 | Wheat | endoplasmic reticulum | 25.34 | 29.84 |
| TraesCS4B01G349500.1 | Wheat | plasma membrane | 25.0 | 28.63 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF163 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G362300 |
| EnsemblPlants:TraesCS4B01G362300.1 | TIGR:cd00333 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4B:+:651514427..651515305
Molecular Weight (calculated)
30392.9 Da
IEP (calculated)
8.460
GRAVY (calculated)
0.423
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGEGKLSA EANLSSDTTM STKDYLDPPP TPLLDAGELG KWSLYRATIA EFTATLLFVY VAVATVIGHK RQTDAEACSG TGVLGIAWAF GGMIAVLVYC
101: TAGISGGHIN PAVTFGLLLA RKVSLPRAFL YMAAQCLGAI CGAAMVRAVH GAHHYALYGG GANEVAPGYS KAGALLAEAA GTFVLVYTVF SATDPKRMAR
201: DSHVPVLAPL LIGFAVLMAH LATIPVTGTG INPARSLGAA VVYNGKKAWA DQWIFWVGPL AGATVAMAYH QYVLRNCAAK HSFGSNHHDV QA
101: TAGISGGHIN PAVTFGLLLA RKVSLPRAFL YMAAQCLGAI CGAAMVRAVH GAHHYALYGG GANEVAPGYS KAGALLAEAA GTFVLVYTVF SATDPKRMAR
201: DSHVPVLAPL LIGFAVLMAH LATIPVTGTG INPARSLGAA VVYNGKKAWA DQWIFWVGPL AGATVAMAYH QYVLRNCAAK HSFGSNHHDV QA
001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.