Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G355600.1 | Wheat | golgi, peroxisome, plasma membrane | 97.95 | 97.95 |
| TraesCS4B01G362300.1 | Wheat | golgi, peroxisome, plasma membrane | 95.55 | 95.55 |
| TraesCS4A01G312700.1 | Wheat | plasma membrane | 82.19 | 82.47 |
| TraesCS6A01G082900.1 | Wheat | golgi, peroxisome, plasma membrane | 79.79 | 78.98 |
| OQU91911 | Sorghum | plasma membrane | 71.23 | 73.76 |
| Zm00001d014285_P001 | Maize | plasma membrane | 69.86 | 72.08 |
| TraesCS2A01G198500.1 | Wheat | plasma membrane | 70.21 | 70.69 |
| TraesCS6A01G222100.1 | Wheat | golgi, peroxisome, plasma membrane | 68.49 | 69.93 |
| TraesCS5A01G100000.1 | Wheat | plasma membrane | 67.47 | 68.88 |
| TraesCS2A01G379800.1 | Wheat | plasma membrane | 68.15 | 68.62 |
| TraesCS2A01G379900.1 | Wheat | plasma membrane | 68.15 | 68.62 |
| Os03t0861300-01 | Rice | cytosol, peroxisome, plasma membrane | 65.75 | 68.57 |
| TraesCS2A01G065700.1 | Wheat | golgi | 66.44 | 68.31 |
| TraesCS5A01G332300.1 | Wheat | plasma membrane | 63.01 | 63.23 |
| TraesCS5A01G181000.1 | Wheat | plastid | 59.25 | 59.66 |
| TraesCS6A01G405700.1 | Wheat | golgi | 59.59 | 59.59 |
| TraesCS6A01G405600.1 | Wheat | plasma membrane | 59.25 | 59.25 |
| TraesCS6A01G245100.1 | Wheat | golgi, peroxisome, plasma membrane | 58.56 | 58.97 |
| TraesCS4A01G286200.1 | Wheat | golgi, peroxisome, plasma membrane | 55.14 | 52.96 |
| TraesCS7A01G191200.1 | Wheat | golgi, peroxisome, plasma membrane | 54.79 | 52.63 |
| TraesCS2A01G407700.2 | Wheat | golgi, peroxisome, plasma membrane | 45.21 | 45.67 |
| TraesCS6A01G250300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.16 | 36.55 |
| TraesCS2A01G414100.1 | Wheat | plasma membrane | 30.82 | 36.29 |
| TraesCS7A01G331300.1 | Wheat | unclear | 29.45 | 34.68 |
| TraesCS2A01G374400.1 | Wheat | plasma membrane | 31.16 | 34.34 |
| TraesCS4A01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 29.11 | 34.0 |
| TraesCS3A01G535300.1 | Wheat | plasma membrane | 28.77 | 33.33 |
| TraesCS1A01G165400.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 29.45 | 32.7 |
| TraesCS2A01G414200.1 | Wheat | plastid | 28.08 | 31.3 |
| TraesCS3A01G434600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 25.0 | 30.8 |
| TraesCS3A01G155800.1 | Wheat | plasma membrane | 26.03 | 30.65 |
| TraesCS5A01G518300.1 | Wheat | golgi, plasma membrane, vacuole | 25.0 | 28.52 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF163 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5A01G530600 |
| EnsemblPlants:TraesCS5A01G530600.1 | TIGR:cd00333 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5A:+:689251869..689252747
Molecular Weight (calculated)
30298.7 Da
IEP (calculated)
8.577
GRAVY (calculated)
0.430
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGEGKLST EANVNSGTTM SSKDYLDPPP TPLLDAGELG KWSLYRATIA EFTATLLFVY VAVATVIGHK RQTDAQACSG AGVLGIAWAF GGMIAVLVYC
101: TAGISGGHIN PAVTFGLLLA RKVSLPRAFL YMAAQCLGAI CGAAMVRAVH GAHHYVLYGG GANEVAPGYS KVGALLAEAA GTFVLVYTVF SATDPKRMAR
201: DSHVPVLAPL LIGFAVLMAH LATIPVTGTG INPARSLGAA VVYNGKKAWA DQWIFWVGPL AGATVAMAYH QYVLRNGAAK HSFGSNNDDV EA
101: TAGISGGHIN PAVTFGLLLA RKVSLPRAFL YMAAQCLGAI CGAAMVRAVH GAHHYVLYGG GANEVAPGYS KVGALLAEAA GTFVLVYTVF SATDPKRMAR
201: DSHVPVLAPL LIGFAVLMAH LATIPVTGTG INPARSLGAA VVYNGKKAWA DQWIFWVGPL AGATVAMAYH QYVLRNGAAK HSFGSNNDDV EA
001: MAKDVEGPDG FQTRDYEDPP PTPFFDAEEL TKWSLYRAVI AEFVATLLFL YVTVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSHYV NYGGGANFLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIFNKS KPWDDHWIFW VGPFIGATIA AFYHQFVLRA SGSKSLGSFR SAANV
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSHYV NYGGGANFLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIFNKS KPWDDHWIFW VGPFIGATIA AFYHQFVLRA SGSKSLGSFR SAANV
Arabidopsis Description
PIP2-3Aquaporin PIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:P30302]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.