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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • endoplasmic reticulum 2
  • extracellular 2
  • vacuole 2
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G346700.1
TraesCS2B01G365000.1
TraesCS2D01G345400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G25810.1 TraesCS2A01G346700.1 AT1G27300.1 21798944
AT2G25810.1 TraesCS2B01G365000.1 AT1G27300.1 21798944
AT2G25810.1 TraesCS2D01G345400.1 AT1G27300.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G163400.1 Wheat endoplasmic reticulum, extracellular, vacuole 94.09 90.65
TraesCS3B01G182200.1 Wheat endoplasmic reticulum, extracellular, vacuole 95.78 90.44
Os01t0232000-00 Rice cytosol, endoplasmic reticulum, plasma membrane 78.48 74.1
EES02191 Sorghum cytosol 77.22 72.62
GSMUA_Achr10P... Banana cytosol, plasma membrane, vacuole 71.31 67.87
Zm00001d039293_P001 Maize plastid 78.48 64.81
HORVU3Hr1G031620.5 Barley nucleus, peroxisome, plastid 82.7 61.64
TraesCS3A01G155800.1 Wheat plasma membrane 63.29 60.48
KRH62059 Soybean cytosol, plasma membrane, vacuole 60.34 58.13
CDY35336 Canola extracellular 35.02 58.04
AT2G25810.1 Thale cress cytosol, golgi, plasma membrane 60.34 57.43
KRH52727 Soybean cytosol 59.49 57.32
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 59.49 56.63
CDX77009 Canola cytosol, plasma membrane, vacuole 59.49 56.63
PGSC0003DMT400024847 Potato extracellular, plasma membrane, vacuole 56.96 54.66
Solyc08g066840.2.1 Tomato endoplasmic reticulum, plasma membrane 56.12 53.85
TraesCS5A01G518300.1 Wheat golgi, plasma membrane, vacuole 57.81 53.52
GSMUA_Achr9P06260_001 Banana cytosol, golgi, plasma membrane 57.38 53.33
TraesCS4A01G410800.1 Wheat golgi, plasma membrane, vacuole 52.74 50.0
GSMUA_Achr1P13800_001 Banana cytosol 53.59 50.0
TraesCS6A01G250300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 49.79 47.39
TraesCS2A01G414100.1 Wheat plasma membrane 48.95 46.77
TraesCS3A01G535300.1 Wheat plasma membrane 49.37 46.43
VIT_04s0008g03550.t01 Wine grape plasma membrane 58.65 46.18
TraesCS1A01G165400.1 Wheat golgi, mitochondrion, plasma membrane, plastid 49.79 44.87
TraesCS7A01G331300.1 Wheat unclear 43.46 41.53
TraesCS2A01G374400.1 Wheat plasma membrane 42.19 37.74
TraesCS2A01G414200.1 Wheat plastid 38.4 34.73
TraesCS2A01G198500.1 Wheat plasma membrane 33.76 27.59
TraesCS6A01G222100.1 Wheat golgi, peroxisome, plasma membrane 32.49 26.92
TraesCS2A01G379900.1 Wheat plasma membrane 32.91 26.9
TraesCS2A01G379800.1 Wheat plasma membrane 32.49 26.55
TraesCS5A01G100000.1 Wheat plasma membrane 31.65 26.22
TraesCS4A01G312700.1 Wheat plasma membrane 31.22 25.43
TraesCS5A01G332300.1 Wheat plasma membrane 31.22 25.43
TraesCS2A01G065700.1 Wheat golgi 30.38 25.35
TraesCS5A01G530600.1 Wheat golgi, peroxisome, plasma membrane 30.8 25.0
TraesCS6A01G082900.1 Wheat golgi, peroxisome, plasma membrane 29.96 24.07
TraesCS6A01G405600.1 Wheat plasma membrane 29.11 23.63
TraesCS6A01G405700.1 Wheat golgi 29.11 23.63
TraesCS5A01G181000.1 Wheat plastid 28.69 23.45
TraesCS7A01G191200.1 Wheat golgi, peroxisome, plasma membrane 28.69 22.37
TraesCS6A01G245100.1 Wheat golgi, peroxisome, plasma membrane 27.0 22.07
TraesCS4A01G286200.1 Wheat golgi, peroxisome, plasma membrane 28.27 22.04
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 19.41 15.92
Protein Annotations
EnsemblPlants:TraesCS3A01G434600.1EnsemblPlantsGene:TraesCS3A01G434600Gene3D:1.20.1080.10GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085InterPro:Aquaporin-like
InterPro:Aquaporin_transptrInterPro:IPR023271InterPro:MIPPANTHER:PTHR19139PANTHER:PTHR19139:SF186PFAM:PF00230
PRINTS:PR00783SEG:segSUPFAM:SSF81338TMHMM:TMhelixMapMan:24.3.1.3:
Description
No Description!
Coordinates
chr3A:+:676767877..676768731
Molecular Weight (calculated)
24080.6 Da
IEP (calculated)
7.212
GRAVY (calculated)
0.837
Length
237 amino acids
Sequence
(BLAST)
001: MAKFALGHHS EATDAGCVRA VLAEAVLTFL FVFSGVGSTM AAGRLAGGAD TIMGLTAVAL AHAMVVAVMV SAGLHVSGGH ITLFRSALYV LAQLLGSSLA
101: CLLLAFLTGG AVTMPVHALA AGVGAPQGVL WEAVLTFSLL FTVYATVVDP RRSIGNLGPL LVGFVVGANV LAGGPFSGAS MNPARSFGPA LASANWASQW
201: VYWVGPMIGG PLAGLVYEGL FMVRPGHQQL PSDGNDF
Best Arabidopsis Sequence Match ( AT2G25810.1 )
(BLAST)
001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN
Arabidopsis Description
TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.