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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: unclear

Predictor Summary:
  • golgi 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:unclear
Any Predictor:plastid, secretory
MultiLoc:golgi
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G165400.1
TraesCS1B01G182200.1
TraesCS1D01G175200.1
TraesCS2A01G198500.1
TraesCS2A01G374400.1
TraesCS2B01G225900.1
TraesCS2B01G391400.1
TraesCS2D01G206300.1
TraesCS2D01G370800.1
TraesCS7A01G331300.1
TraesCS7B01G243000.1
TraesCS7D01G339600.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G16240.1 TraesCS1A01G165400.1 AT1G73190.1 23163742
AT3G16240.1 TraesCS1B01G182200.1 AT1G73190.1 23163742
AT3G16240.1 TraesCS1D01G175200.1 AT1G73190.1 23163742
AT3G16240.1 TraesCS2A01G374400.1 AT1G73190.1 23163742
AT3G16240.1 TraesCS2B01G391400.1 AT1G73190.1 23163742
AT3G16240.1 TraesCS2D01G370800.1 AT1G73190.1 23163742
AT3G16240.1 TraesCS7A01G331300.1 AT3G16240.1 23163742
AT3G16240.1 TraesCS7B01G243000.1 AT3G16240.1 23163742
AT3G16240.1 TraesCS7D01G339600.1 AT3G16240.1 23163742
AT3G16240.1 TraesCS2A01G198500.1 AT3G53420.1 23163742
AT3G16240.1 TraesCS2B01G225900.1 AT3G53420.1 23163742
AT3G16240.1 TraesCS2D01G206300.1 AT3G53420.1 23163742
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G243000.1 Wheat plasma membrane 97.58 97.58
HORVU7Hr1G081770.8 Barley plasma membrane 95.16 94.78
Os06t0336200-01 Rice nucleus 88.31 88.31
EER89797 Sorghum plasma membrane 88.31 88.31
TraesCS7D01G339600.1 Wheat plasma membrane 96.77 86.02
GSMUA_Achr9P28940_001 Banana plasma membrane 79.03 80.0
GSMUA_Achr6P05830_001 Banana endoplasmic reticulum, extracellular, plasma membrane 78.23 79.18
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid, vacuole 77.42 79.01
Solyc12g044330.1.1 Tomato plastid 77.82 77.82
KRH09912 Soybean endoplasmic reticulum, plasma membrane, vacuole 77.02 77.33
KRG93712 Soybean plasma membrane, vacuole 73.79 77.22
PGSC0003DMT400042613 Potato cytosol, extracellular, plasma membrane 77.42 77.11
PGSC0003DMT400068047 Potato cytosol, extracellular, plastid, vacuole 77.02 77.02
KRH44312 Soybean extracellular 76.21 76.21
KRH47241 Soybean mitochondrion 76.21 76.21
KRH23420 Soybean plasma membrane, vacuole 75.4 75.71
CDX82410 Canola plasma membrane 74.19 73.9
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 73.79 73.49
CDX97733 Canola endoplasmic reticulum, extracellular 73.39 73.39
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 73.39 73.39
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 73.39 73.09
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 73.39 73.09
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 72.58 72.58
AT3G16240.1 Thale cress plasma membrane 71.77 71.2
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 60.08 70.95
VIT_09s0002g04020.t01 Wine grape plasma membrane, vacuole 70.56 70.28
TraesCS6A01G250300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 70.16 69.88
PGSC0003DMT400006558 Potato endoplasmic reticulum, plasma membrane 69.76 69.48
Solyc06g066560.1.1 Tomato mitochondrion 73.79 67.03
TraesCS2A01G414100.1 Wheat plasma membrane 66.94 66.94
CDX75873 Canola extracellular, golgi, vacuole 74.19 66.91
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 64.52 63.24
TraesCS4A01G410800.1 Wheat golgi, plasma membrane, vacuole 63.31 62.8
TraesCS3A01G535300.1 Wheat plasma membrane 56.85 55.95
TraesCS1A01G165400.1 Wheat golgi, mitochondrion, plasma membrane, plastid 48.39 45.63
TraesCS3A01G434600.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.53 43.46
TraesCS3A01G155800.1 Wheat plasma membrane 41.53 41.53
TraesCS2A01G414200.1 Wheat plastid 43.55 41.22
TraesCS5A01G518300.1 Wheat golgi, plasma membrane, vacuole 41.94 40.62
TraesCS2A01G374400.1 Wheat plasma membrane 43.15 40.38
TraesCS2A01G198500.1 Wheat plasma membrane 38.71 33.1
TraesCS6A01G222100.1 Wheat golgi, peroxisome, plasma membrane 37.9 32.87
TraesCS2A01G379900.1 Wheat plasma membrane 37.9 32.41
TraesCS2A01G379800.1 Wheat plasma membrane 37.5 32.07
TraesCS2A01G065700.1 Wheat golgi 36.69 32.04
TraesCS5A01G100000.1 Wheat plasma membrane 35.89 31.12
TraesCS6A01G245100.1 Wheat golgi, peroxisome, plasma membrane 35.89 30.69
TraesCS4A01G312700.1 Wheat plasma membrane 35.89 30.58
TraesCS5A01G332300.1 Wheat plasma membrane 35.08 29.9
TraesCS5A01G530600.1 Wheat golgi, peroxisome, plasma membrane 34.68 29.45
TraesCS6A01G405600.1 Wheat plasma membrane 34.68 29.45
TraesCS6A01G405700.1 Wheat golgi 34.68 29.45
TraesCS5A01G181000.1 Wheat plastid 34.27 29.31
TraesCS6A01G082900.1 Wheat golgi, peroxisome, plasma membrane 33.47 28.14
TraesCS7A01G191200.1 Wheat golgi, peroxisome, plasma membrane 29.44 24.01
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 27.02 23.18
TraesCS4A01G286200.1 Wheat golgi, peroxisome, plasma membrane 28.23 23.03
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF266SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixEnsemblPlantsGene:TraesCS7A01G331300
EnsemblPlants:TraesCS7A01G331300.1TIGR:cd00333::::
Description
No Description!
Coordinates
chr7A:+:484524671..484525606
Molecular Weight (calculated)
25183.6 Da
IEP (calculated)
5.470
GRAVY (calculated)
0.893
Length
248 amino acids
Sequence
(BLAST)
001: MPASIAFGRF DDSFSLASFK AYIAEFISTL IFVFAGVGSA IAYSKVSGGA PLDPSGLIAV AICHGFGLFV AVAVGANISG GHVNPAVTFG LALGGQITIL
101: TGIFYWVAQL LGAIVGAFLV QFCTGVATPT HGLSGVGAFE GVVMEIIVTF GLVYTVYATA ADPKKGSLGT IAPIAIGFIV GANILVAGPF SGGSMNPARS
201: FGPAVASGDF TNIWIYWAGP LIGGGLAGVV YRYLYMCDDH TAVAGNDY
Best Arabidopsis Sequence Match ( AT2G36830.1 )
(BLAST)
001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
Arabidopsis Description
TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.