Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 3
- extracellular 3
- vacuole 2
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82410 | Canola | plasma membrane | 96.0 | 96.39 |
| Bra001626.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 94.8 | 95.18 |
| CDX75873 | Canola | extracellular, golgi, vacuole | 95.6 | 86.91 |
| Solyc12g044330.1.1 | Tomato | plastid | 81.2 | 81.85 |
| KRH09912 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 80.0 | 80.97 |
| KRH23420 | Soybean | plasma membrane, vacuole | 78.8 | 79.76 |
| KRG93712 | Soybean | plasma membrane, vacuole | 75.6 | 79.75 |
| GSMUA_Achr6P05830_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 77.2 | 78.78 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid, vacuole | 76.0 | 78.19 |
| GSMUA_Achr9P28940_001 | Banana | plasma membrane | 76.4 | 77.96 |
| PGSC0003DMT400006558 | Potato | endoplasmic reticulum, plasma membrane | 77.6 | 77.91 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 76.4 | 76.4 |
| VIT_09s0002g04020.t01 | Wine grape | plasma membrane, vacuole | 76.0 | 76.31 |
| Os06t0336200-01 | Rice | nucleus | 74.8 | 75.4 |
| EER89797 | Sorghum | plasma membrane | 74.0 | 74.6 |
| Solyc06g066560.1.1 | Tomato | mitochondrion | 80.4 | 73.63 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 73.2 | 73.2 |
| TraesCS7B01G243000.1 | Wheat | plasma membrane | 72.0 | 72.58 |
| HORVU7Hr1G081770.8 | Barley | plasma membrane | 72.0 | 72.29 |
| TraesCS7A01G331300.1 | Wheat | unclear | 71.2 | 71.77 |
| TraesCS7D01G339600.1 | Wheat | plasma membrane | 72.4 | 64.87 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 31.2 | 62.9 |
| AT3G26520.1 | Thale cress | plasma membrane | 61.6 | 60.87 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 60.8 | 60.56 |
| AT4G01470.1 | Thale cress | cytosol, golgi, plasma membrane | 56.8 | 56.35 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 53.6 | 53.82 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 55.2 | 51.69 |
| AT1G73190.1 | Thale cress | plasma membrane | 54.0 | 50.37 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 42.4 | 41.41 |
| AT2G16850.1 | Thale cress | plasma membrane | 37.6 | 33.81 |
| AT3G53420.1 | Thale cress | plasma membrane | 38.8 | 33.8 |
| AT2G37180.1 | Thale cress | plasma membrane | 38.4 | 33.68 |
| AT4G35100.1 | Thale cress | plasma membrane | 37.6 | 33.57 |
| AT5G60660.1 | Thale cress | plasma membrane | 37.6 | 32.3 |
| AT2G39010.1 | Thale cress | plasma membrane | 37.2 | 32.18 |
| AT3G54820.1 | Thale cress | plasma membrane | 36.4 | 31.82 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 36.4 | 31.71 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 36.0 | 31.47 |
| AT3G61430.1 | Thale cress | plasma membrane | 35.6 | 31.12 |
| AT4G23400.1 | Thale cress | plasma membrane | 35.6 | 31.01 |
| AT2G37170.2 | Thale cress | plasma membrane | 38.4 | 29.27 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 32.0 | 26.58 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | PDB:5I32 | EntrezGene:820870 | ProteinID:AAC49992.1 | ProteinID:AEE75789.1 |
| EMBL:AK229954 | ArrayExpress:AT3G16240 | EnsemblPlantsGene:AT3G16240 | RefSeq:AT3G16240 | TAIR:AT3G16240 | RefSeq:AT3G16240-TAIR-G |
| EnsemblPlants:AT3G16240.1 | TAIR:AT3G16240.1 | EMBL:AY065181 | EMBL:AY081622 | EMBL:AY085921 | InterPro:Aquaporin-like |
| InterPro:Aquaporin_transptr | ProteinID:BAB01264.1 | Symbol:DELTA-TIP | GO:GO:0000326 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0009505 | GO:GO:0009506 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009705 | GO:GO:0009941 | GO:GO:0015200 | GO:GO:0015250 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030312 | GO:GO:0042802 | GO:GO:0042807 | GO:GO:0055085 |
| GO:GO:0072489 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | RefSeq:NP_188245.1 | PFAM:PF00230 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000016 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005417 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009062 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF257 | UniProt:Q41951 | SUPFAM:SSF81338 |
| TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EMBL:U39485 | UniParc:UPI00000ACE7E | EMBL:Z18064 | EMBL:Z29043 |
| EMBL:Z29044 | SEG:seg | : | : | : | : |
Description
TIP2-1Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951]
Coordinates
chr3:+:5505360..5507050
Molecular Weight (calculated)
25028.5 Da
IEP (calculated)
5.430
GRAVY (calculated)
0.974
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.