Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67380 | Canola | plastid | 82.47 | 93.67 |
| CDY66645 | Canola | plastid | 82.47 | 93.67 |
| CDY53270 | Canola | plasma membrane | 93.23 | 93.23 |
| Bra017222.1-P | Field mustard | cytosol | 93.23 | 93.23 |
| AT3G26520.1 | Thale cress | plasma membrane | 85.66 | 84.98 |
| VIT_08s0007g04780.t01 | Wine grape | cytosol | 84.86 | 84.86 |
| PGSC0003DMT400072432 | Potato | cytosol | 83.27 | 84.27 |
| Solyc10g083880.1.1 | Tomato | plastid | 82.47 | 83.47 |
| KRH67767 | Soybean | mitochondrion | 82.87 | 83.2 |
| KRG96046 | Soybean | nucleus | 82.47 | 82.8 |
| Os03t0146100-01 | Rice | nucleus | 79.68 | 80.0 |
| EER92857 | Sorghum | cytosol | 78.49 | 78.8 |
| GSMUA_Achr8P12920_001 | Banana | cytosol, plasma membrane, vacuole | 78.49 | 78.8 |
| GSMUA_Achr1P01270_001 | Banana | cytosol, plasma membrane, vacuole | 77.69 | 78.0 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, vacuole | 77.29 | 77.6 |
| Zm00001d027652_P001 | Maize | plasma membrane | 76.49 | 76.8 |
| GSMUA_Achr5P19470_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 75.7 | 75.7 |
| TraesCS4A01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 75.3 | 75.6 |
| TraesCS4B01G310900.1 | Wheat | unclear | 75.3 | 75.6 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 74.5 | 74.8 |
| VIT_06s0061g00730.t01 | Wine grape | cytosol, plasma membrane, vacuole | 73.71 | 73.71 |
| AT4G01470.1 | Thale cress | cytosol, golgi, plasma membrane | 72.51 | 72.22 |
| TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 71.71 | 70.04 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 62.55 | 62.8 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 62.55 | 62.8 |
| AT3G16240.1 | Thale cress | plasma membrane | 60.56 | 60.8 |
| AT1G73190.1 | Thale cress | plasma membrane | 58.57 | 54.85 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 58.17 | 54.68 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 52.59 | 53.01 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 23.51 | 47.58 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 39.44 | 38.67 |
| AT2G16850.1 | Thale cress | plasma membrane | 34.66 | 31.3 |
| AT4G35100.1 | Thale cress | plasma membrane | 34.26 | 30.71 |
| AT2G39010.1 | Thale cress | plasma membrane | 35.06 | 30.45 |
| AT3G53420.1 | Thale cress | plasma membrane | 34.66 | 30.31 |
| AT3G54820.1 | Thale cress | plasma membrane | 34.26 | 30.07 |
| AT2G37180.1 | Thale cress | plasma membrane | 33.86 | 29.82 |
| AT5G60660.1 | Thale cress | plasma membrane | 34.26 | 29.55 |
| AT4G23400.1 | Thale cress | plasma membrane | 32.27 | 28.22 |
| AT3G61430.1 | Thale cress | plasma membrane | 31.87 | 27.97 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 31.87 | 27.87 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 31.47 | 27.62 |
| AT2G37170.2 | Thale cress | plasma membrane | 33.86 | 25.91 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 28.69 | 23.92 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EntrezGene:818255 | ProteinID:AAA32806.1 | ProteinID:AAD31569.1 | ProteinID:AEC09303.1 |
| EMBL:AF370172 | ArrayExpress:AT2G36830 | EnsemblPlantsGene:AT2G36830 | RefSeq:AT2G36830 | TAIR:AT2G36830 | RefSeq:AT2G36830-TAIR-G |
| EnsemblPlants:AT2G36830.1 | TAIR:AT2G36830.1 | EMBL:AY059134 | EMBL:AY087558 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| ProteinID:CAA45115.1 | Symbol:GAMMA-TIP | GO:GO:0000326 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 |
| GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0009536 | GO:GO:0009705 |
| GO:GO:0009941 | GO:GO:0015204 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0015840 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 | GO:GO:0071918 | GO:GO:0080170 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | RefSeq:NP_181221.1 | UniProt:P25818 | PFAM:PF00230 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000034 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000258 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005059 | PO:PO:0006036 | PO:PO:0006203 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020121 | PO:PO:0020135 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025181 | PO:PO:0025281 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF265 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0000136FB5 | EMBL:X54854 |
| EMBL:X72581 | EMBL:Z18124 | EMBL:Z18771 | EMBL:Z26215 | : | : |
Description
TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
Coordinates
chr2:+:15445294..15446621
Molecular Weight (calculated)
25621.3 Da
IEP (calculated)
6.506
GRAVY (calculated)
0.843
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.