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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P01270_001
GSMUA_Achr2P10640_001
GSMUA_Achr4P26010_001
GSMUA_Achr5P19470_001
GSMUA_Achr6P05830_001
GSMUA_Achr8P12920_001
GSMUA_Achr9P28940_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G36830.1 GSMUA_Achr2P10640_001 AT1G73190.1 21798944
AT2G36830.1 GSMUA_Achr4P26010_001 AT1G73190.1 21798944
AT3G26520.1 GSMUA_Achr2P10640_001 AT1G73190.1 23163742
AT3G26520.1 GSMUA_Achr4P26010_001 AT1G73190.1 23163742
AT3G26520.1 GSMUA_Achr10P... AT3G16240.1 23163742
AT3G26520.1 GSMUA_Achr6P05830_001 AT3G16240.1 23163742
AT3G26520.1 GSMUA_Achr9P28940_001 AT3G16240.1 23163742
AT3G26520.1 GSMUA_Achr11P... AT3G26520.1 23163742
AT3G26520.1 GSMUA_Achr1P01270_001 AT3G26520.1 23163742
AT3G26520.1 GSMUA_Achr5P19470_001 AT3G26520.1 23163742
AT3G26520.1 GSMUA_Achr8P12920_001 AT3G26520.1 23163742
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0146100-01 Rice nucleus 86.4 86.4
GSMUA_Achr8P12920_001 Banana cytosol, plasma membrane, vacuole 84.8 84.8
Zm00001d027652_P001 Maize plasma membrane 84.8 84.8
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 84.8 84.8
EER92857 Sorghum cytosol 84.0 84.0
GSMUA_Achr5P19470_001 Banana endoplasmic reticulum, plasma membrane, vacuole 82.8 82.47
VIT_08s0007g04780.t01 Wine grape cytosol 82.4 82.07
CDY67380 Canola plastid 71.6 81.0
CDY66645 Canola plastid 71.6 81.0
TraesCS4A01G410800.1 Wheat golgi, plasma membrane, vacuole 80.8 80.8
TraesCS4B01G310900.1 Wheat unclear 80.4 80.4
Bra017222.1-P Field mustard cytosol 80.4 80.08
Solyc06g074820.2.1 Tomato plastid 80.0 80.0
PGSC0003DMT400018375 Potato cytosol 79.6 79.6
HORVU4Hr1G079230.1 Barley vacuole 79.6 79.6
CDY53270 Canola plasma membrane 79.6 79.28
AT2G36830.1 Thale cress golgi, plasma membrane, vacuole 78.0 77.69
KRH67767 Soybean mitochondrion 77.2 77.2
CDY13639 Canola plasma membrane 78.0 77.08
KRG96046 Soybean nucleus 76.8 76.8
CDX83623 Canola golgi, plasma membrane, plastid 77.6 76.68
Bra025210.1-P Field mustard plasma membrane 77.6 76.68
GSMUA_Achr10P... Banana plasma membrane 77.2 76.59
GSMUA_Achr6P15380_001 Banana cytosol, plasma membrane, vacuole 76.8 76.19
TraesCS4D01G308800.1 Wheat golgi, plasma membrane, vacuole 78.0 75.88
AT3G26520.1 Thale cress plasma membrane 76.4 75.49
Bra032937.1-P Field mustard plasma membrane 75.6 74.7
CDY28539 Canola plasma membrane 75.6 74.7
CDY48983 Canola plasma membrane 75.6 74.7
VIT_06s0061g00730.t01 Wine grape cytosol, plasma membrane, vacuole 73.6 73.31
GSMUA_Achr6P05830_001 Banana endoplasmic reticulum, extracellular, plasma membrane 62.8 64.08
GSMUA_Achr9P28940_001 Banana plasma membrane 62.4 63.67
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 62.4 62.65
GSMUA_Achr11P... Banana extracellular, plasma membrane 62.4 62.65
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid, vacuole 60.4 62.14
GSMUA_Achr2P10640_001 Banana cytosol, golgi, plasma membrane 60.4 59.45
GSMUA_Achr4P26010_001 Banana cytosol, golgi, plasma membrane 60.4 59.45
GSMUA_Achr10P... Banana cytosol, plasma membrane, vacuole 54.0 54.22
GSMUA_Achr9P06260_001 Banana cytosol, golgi, plasma membrane 46.4 45.49
GSMUA_Achr1P13800_001 Banana cytosol 44.8 44.09
GSMUA_Achr4P24600_001 Banana golgi, plasma membrane, plastid 43.2 41.06
GSMUA_AchrUn_... Banana extracellular 30.4 38.97
GSMUA_Achr1P00370_001 Banana extracellular 28.8 37.89
GSMUA_Achr4P20780_001 Banana extracellular 29.6 37.76
GSMUA_Achr11P... Banana extracellular 29.2 37.24
GSMUA_AchrUn_... Banana extracellular 28.0 36.84
GSMUA_Achr8P33980_001 Banana extracellular 29.2 36.68
GSMUA_Achr1P26390_001 Banana endoplasmic reticulum, extracellular, plasma membrane, plastid 28.8 36.36
GSMUA_Achr5P11480_001 Banana plasma membrane 28.8 36.36
GSMUA_Achr5P12400_001 Banana extracellular 27.6 36.32
GSMUA_AchrUn_... Banana extracellular 27.2 35.79
GSMUA_Achr2P03980_001 Banana extracellular 27.2 35.79
GSMUA_Achr8P11540_001 Banana extracellular 27.2 35.79
GSMUA_AchrUn_... Banana extracellular 26.8 35.26
GSMUA_Achr8P18910_001 Banana extracellular 27.6 35.2
GSMUA_Achr10P... Banana plasma membrane 30.0 35.05
GSMUA_Achr11P... Banana extracellular 29.6 34.58
GSMUA_Achr8P33990_001 Banana extracellular 27.2 34.34
GSMUA_Achr1P07460_001 Banana extracellular 22.8 32.57
GSMUA_Achr1P02360_001 Banana unclear 36.0 31.91
GSMUA_Achr2P11190_001 Banana plasma membrane 35.6 31.67
GSMUA_Achr1P26380_001 Banana plasma membrane 32.4 28.83
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr1G01270_001EnsemblPlants:GSMUA_Achr1P01270_001EnsemblPlants:GSMUA_Achr1T01270_001InterPro:IPR023271UniProt:M0RW35
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF265SUPFAM:SSF81338TMHMM:TMhelixUniParc:UPI000295CA24SEG:seg:
Description
Probable aquaporin TIP1-1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G01270_001]
Coordinates
chr1:-:965165..966014
Molecular Weight (calculated)
25675.1 Da
IEP (calculated)
5.882
GRAVY (calculated)
0.795
Length
250 amino acids
Sequence
(BLAST)
001: MPIPRIAVGT QEEATHPGTL KAALAEFIST LIFVFAGQGS GMAFSKLTGG AATTPAGLIA AALAHAFALF VAVSVGANIS GGHVNPAVTF GVFIGGNITL
101: LRSIIYWIAQ LLGSTVACLL LRYSTGGLST GSFALSGVSV WEALVLEIVM TFGLVYTVYA TAVDPKKGSL GTIAPIAIGF IVGANILAGG AFDGASMNPA
201: VSFGPALVSW SWDDHWVYWA GPLIGGGLAG LVYEFFFISH THEQLSSADY
Best Arabidopsis Sequence Match ( AT3G26520.1 )
(BLAST)
001: MPTRNIAIGG VQEEVYHPNA LRAALAEFIS TLIFVFAGSG SGIAFNKITD NGATTPSGLV AAALAHAFGL FVAVSVGANI SGGHVNPAVT FGVLLGGNIT
101: LLRGILYWIA QLLGSVAACF LLSFATGGEP IPAFGLSAGV GSLNALVFEI VMTFGLVYTV YATAVDPKNG SLGTIAPIAI GFIVGANILA GGAFSGASMN
201: PAVAFGPAVV SWTWTNHWVY WAGPLIGGGL AGIIYDFVFI DENAHEQLPT TDY
Arabidopsis Description
TIP1-2Aquaporin TIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q41963]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.