Factsheet for GSMUA_Achr1P26390_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, extracellular, plasma membrane

Predictor Summary:

plastid 3
nucleus 1
endoplasmic reticulum 2
extracellular 2
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P33990_001	Banana	extracellular	86.87	86.87
GSMUA_Achr8P33980_001	Banana	extracellular	84.85	84.42
GSMUA_Achr5P11480_001	Banana	plasma membrane	83.33	83.33
GSMUA_Achr11P...	Banana	extracellular	75.76	76.53
GSMUA_Achr8P18910_001	Banana	extracellular	75.25	76.02
GSMUA_Achr4P20780_001	Banana	extracellular	73.74	74.49
GSMUA_Achr1P00370_001	Banana	extracellular	70.2	73.16
GSMUA_AchrUn_...	Banana	extracellular	71.72	72.82
GSMUA_AchrUn_...	Banana	extracellular	69.7	72.63
GSMUA_AchrUn_...	Banana	extracellular	69.7	72.63
GSMUA_Achr8P11540_001	Banana	extracellular	69.7	72.63
GSMUA_AchrUn_...	Banana	extracellular	69.19	72.11
GSMUA_Achr5P12400_001	Banana	extracellular	69.19	72.11
GSMUA_Achr2P03980_001	Banana	extracellular	68.18	71.05
GSMUA_Achr1P07460_001	Banana	extracellular	60.61	68.57
GSMUA_Achr10P...	Banana	plasma membrane	70.2	64.95
GSMUA_Achr11P...	Banana	extracellular	69.7	64.49
GSMUA_Achr1P02360_001	Banana	unclear	82.83	58.16
GSMUA_Achr2P11190_001	Banana	plasma membrane	82.32	58.01
GSMUA_Achr1P26380_001	Banana	plasma membrane	74.75	52.67
GSMUA_Achr4P26010_001	Banana	cytosol, golgi, plasma membrane	39.39	30.71
GSMUA_Achr9P28940_001	Banana	plasma membrane	37.88	30.61
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid, vacuole	36.36	29.63
GSMUA_Achr2P10640_001	Banana	cytosol, golgi, plasma membrane	37.88	29.53
GSMUA_Achr10P...	Banana	plasma membrane	37.37	29.37
GSMUA_Achr8P12920_001	Banana	cytosol, plasma membrane, vacuole	36.87	29.2
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	36.36	28.92
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	36.36	28.92
GSMUA_Achr11P...	Banana	cytosol, extracellular, vacuole	36.36	28.8
GSMUA_Achr1P01270_001	Banana	cytosol, plasma membrane, vacuole	36.36	28.8
GSMUA_Achr6P15380_001	Banana	cytosol, plasma membrane, vacuole	36.36	28.57
GSMUA_Achr6P05830_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	35.35	28.57
GSMUA_Achr5P19470_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	35.86	28.29
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	34.34	27.31
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	31.82	24.71
GSMUA_Achr4P24600_001	Banana	golgi, plasma membrane, plastid	32.32	24.33
GSMUA_Achr1P13800_001	Banana	cytosol	29.8	23.23

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr1G26390_001	EnsemblPlants:GSMUA_Achr1P26390_001	EnsemblPlants:GSMUA_Achr1T26390_001	InterPro:IPR023271	UniProt:M0S396
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF260	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI000296432E	SEG:seg

Description

Aquaporin PIP2-7 [Source:GMGC_GENE;Acc:GSMUA_Achr1G26390_001]

Coordinates

chr1:-:21893388..21894443

Molecular Weight (calculated)

21160.1 Da

IEP (calculated)

10.399

GRAVY (calculated)

0.599

Length

198 amino acids

Sequence
(BLAST)

001: MIFVLVYCTA DISGGHINPA VTLGLFVARK VSLLRAVLYM VAQCLGAICG VRIVKAIMKQ QFNAFGGGVN VVAPGHSKGT ALGTEIVGTF VLVYTVFSAT
101: DPKRSARDSH VPVLAPLSIG FAVFMVHLAT IPITGTGINP ARSLGAAVIF NQHKPWHDHW IFWVGPFGGA LAAAVYYQYV LRASTIKDLV SFRSSRSN

Best Arabidopsis Sequence Match ( AT2G16850.1 )
(BLAST)

001: MSKEVSEEGR HGKDYVDPPP APLLDMAELK LWSFYRAIIA EFIATLLFLY VTVATVIGHK NQTGPCGGVG LLGIAWAFGG MIFVLVYCTA GISGGHINPA
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN

Arabidopsis Description

PIP2-8Probable aquaporin PIP2-8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.