Factsheet for GSMUA_Achr4P24600_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 5
plasma membrane 4
golgi 4
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	vacuole
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G411500.1	Wheat	endoplasmic reticulum	67.68	67.94
TraesCS2B01G433300.1	Wheat	endoplasmic reticulum	63.5	67.34
TraesCS2A01G414200.1	Wheat	plastid	65.78	66.03
OQU82093	Sorghum	plasma membrane	65.78	64.79
VIT_16s0022g00330.t01	Wine grape	cytosol, extracellular, plasma membrane, plastid	57.41	60.64
Os04t0550800-01	Rice	endoplasmic reticulum, plasma membrane	60.84	59.48
PGSC0003DMT400038394	Potato	plastid	55.89	58.57
Solyc03g093230.2.1	Tomato	plastid	55.51	58.17
Zm00001d026178_P002	Maize	plastid	58.94	58.05
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	49.81	52.61
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	49.81	52.61
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid, vacuole	47.15	51.03
KRH39857	Soybean	plastid	48.67	50.79
KRH23943	Soybean	plasma membrane	34.98	50.27
GSMUA_Achr6P05830_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	46.39	49.8
GSMUA_Achr9P28940_001	Banana	plasma membrane	45.63	48.98
HORVU2Hr1G097780.15	Barley	golgi, mitochondrion, plastid	49.81	48.7
AT3G47440.1	Thale cress	mitochondrion, plastid	47.15	48.44
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	46.77	48.24
VIT_15s0021g02420.t01	Wine grape	extracellular	46.01	48.21
CDY47413	Canola	mitochondrion, plastid	46.77	47.67
CDX99048	Canola	mitochondrion, plastid	46.39	47.29
GSMUA_Achr10P...	Banana	plasma membrane	43.73	45.63
GSMUA_Achr11P...	Banana	cytosol, extracellular, vacuole	42.59	44.8
GSMUA_Achr6P15380_001	Banana	cytosol, plasma membrane, vacuole	41.83	43.65
GSMUA_Achr1P01270_001	Banana	cytosol, plasma membrane, vacuole	41.06	43.2
GSMUA_Achr8P12920_001	Banana	cytosol, plasma membrane, vacuole	40.68	42.8
GSMUA_Achr2P10640_001	Banana	cytosol, golgi, plasma membrane	41.06	42.52
GSMUA_Achr5P19470_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	39.92	41.83
GSMUA_Achr4P26010_001	Banana	cytosol, golgi, plasma membrane	39.54	40.94
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	37.64	39.76
GSMUA_Achr8P11540_001	Banana	extracellular	27.76	38.42
GSMUA_Achr1P00370_001	Banana	extracellular	27.76	38.42
GSMUA_Achr2P03980_001	Banana	extracellular	27.38	37.89
GSMUA_AchrUn_...	Banana	extracellular	26.62	36.84
GSMUA_AchrUn_...	Banana	extracellular	26.62	36.84
GSMUA_AchrUn_...	Banana	extracellular	26.24	36.32
GSMUA_Achr1P13800_001	Banana	cytosol	34.98	36.22
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	34.98	36.08
GSMUA_Achr5P12400_001	Banana	extracellular	25.86	35.79
GSMUA_AchrUn_...	Banana	extracellular	26.24	35.38
GSMUA_Achr4P20780_001	Banana	extracellular	26.24	35.2
GSMUA_Achr10P...	Banana	plasma membrane	28.14	34.58
GSMUA_Achr11P...	Banana	extracellular	25.48	34.18
GSMUA_Achr11P...	Banana	extracellular	27.76	34.11
GSMUA_Achr8P33980_001	Banana	extracellular	25.1	33.17
GSMUA_Achr8P33990_001	Banana	extracellular	24.71	32.83
GSMUA_Achr8P18910_001	Banana	extracellular	24.33	32.65
GSMUA_Achr1P26390_001	Banana	endoplasmic reticulum, extracellular, plasma membrane, plastid	24.33	32.32
GSMUA_Achr5P11480_001	Banana	plasma membrane	23.57	31.31
GSMUA_Achr1P02360_001	Banana	unclear	30.04	28.01
GSMUA_Achr1P26380_001	Banana	plasma membrane	29.66	27.76
GSMUA_Achr2P11190_001	Banana	plasma membrane	28.52	26.69
GSMUA_Achr1P07460_001	Banana	extracellular	17.49	26.29

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0000003	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006810	GO:GO:0006833	GO:GO:0007275	GO:GO:0008150	GO:GO:0009987	GO:GO:0015204
GO:GO:0015250	GO:GO:0015267	GO:GO:0015840	GO:GO:0016020	GO:GO:0016021	GO:GO:0030154
GO:GO:0048235	GO:GO:0055085	GO:GO:0071918	GO:GO:0090406	EnsemblPlantsGene:GSMUA_Achr4G24600_001	EnsemblPlants:GSMUA_Achr4P24600_001
EnsemblPlants:GSMUA_Achr4T24600_001	InterPro:IPR023271	UniProt:M0SRS1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF54	SUPFAM:SSF81338	TMHMM:TMhelix
UniParc:UPI000294B503	SEG:seg	:	:	:	:

Description

Aquaporin TIP5-1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G24600_001]

Coordinates

chr4:+:24336113..24337532

Molecular Weight (calculated)

26717.3 Da

IEP (calculated)

8.792

GRAVY (calculated)

0.723

Length

263 amino acids

Sequence
(BLAST)

001: MSSKLLCFFT SGVNFWLSAA SLRSYLAEFI STFFFVFAAV GSAISARMLT PDVTSDASSL VATALAQGFA LFAAVYIAAD ISGGHVNPAV TFGLAVAGHI
101: GVPTAIFYWI SQLGGSILAC LLLRVASAGQ AIPTTGIGTE MTGFGGAVVE SAITFILVYT VYVAADPGGG GGDGKRKRKM RREVAGPLAV GLTAGACVLA
201: AASLTGGSMN PARSFGPAVV SGNFKNHAVY WVGPLIGAAL AALVHQYLVF PSASSDAYPN STV

Best Arabidopsis Sequence Match ( AT3G47440.1 )
(BLAST)

001: MRRMIPTSFS SKFQGVLSMN ALRCYVSEFI STFFFVLAAV GSVMSSRKLM AGDVSGPFGV LIPAIANALA LSSSVYISWN VSGGHVNPAV TFAMAVAGRI
101: SVPTAMFYWT SQMIASVMAC LVLKVTVMEQ HVPIYKIAGE MTGFGASVLE GVLAFVLVYT VFTASDPRRG LPLAVGPIFI GFVAGANVLA AGPFSGGSMN
201: PACAFGSAMV YGSFKNQAVY WVGPLLGGAT AALVYDNVVV PVEDDRGSST GDAIGV

Arabidopsis Description

TIP5-1Probable aquaporin TIP5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9STX9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.