Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47413 | Canola | mitochondrion, plastid | 92.58 | 91.86 |
| CDX99048 | Canola | mitochondrion, plastid | 92.58 | 91.86 |
| Bra018148.1-P | Field mustard | extracellular, plasma membrane, plastid | 91.41 | 91.76 |
| VIT_16s0022g00330.t01 | Wine grape | cytosol, extracellular, plasma membrane, plastid | 61.72 | 63.45 |
| KRH39857 | Soybean | plastid | 60.16 | 61.11 |
| Solyc03g093230.2.1 | Tomato | plastid | 57.81 | 58.96 |
| PGSC0003DMT400038394 | Potato | plastid | 57.81 | 58.96 |
| KRH23943 | Soybean | plasma membrane | 41.02 | 57.38 |
| TraesCS2D01G411500.1 | Wheat | endoplasmic reticulum | 49.22 | 48.09 |
| TraesCS2B01G433300.1 | Wheat | endoplasmic reticulum | 46.09 | 47.58 |
| GSMUA_Achr4P24600_001 | Banana | golgi, plasma membrane, plastid | 48.44 | 47.15 |
| TraesCS2A01G414200.1 | Wheat | plastid | 48.05 | 46.95 |
| Os04t0550800-01 | Rice | endoplasmic reticulum, plasma membrane | 47.66 | 45.35 |
| OQU82093 | Sorghum | plasma membrane | 46.88 | 44.94 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 42.19 | 43.2 |
| AT3G16240.1 | Thale cress | plasma membrane | 41.41 | 42.4 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 40.62 | 41.6 |
| Zm00001d026178_P002 | Maize | plastid | 42.97 | 41.2 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 38.67 | 39.44 |
| AT3G26520.1 | Thale cress | plasma membrane | 38.28 | 38.74 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 39.06 | 37.45 |
| AT1G73190.1 | Thale cress | plasma membrane | 39.06 | 37.31 |
| AT4G01470.1 | Thale cress | cytosol, golgi, plasma membrane | 36.72 | 37.3 |
| HORVU2Hr1G097780.15 | Barley | golgi, mitochondrion, plastid | 37.5 | 35.69 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 34.38 | 35.34 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 15.62 | 32.26 |
| AT3G61430.1 | Thale cress | plasma membrane | 29.69 | 26.57 |
| AT4G23400.1 | Thale cress | plasma membrane | 29.69 | 26.48 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 29.3 | 26.13 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 28.91 | 25.87 |
| AT2G16850.1 | Thale cress | plasma membrane | 27.73 | 25.54 |
| AT4G35100.1 | Thale cress | plasma membrane | 27.73 | 25.36 |
| AT3G53420.1 | Thale cress | plasma membrane | 27.73 | 24.74 |
| AT2G37180.1 | Thale cress | plasma membrane | 26.95 | 24.21 |
| AT2G39010.1 | Thale cress | plasma membrane | 26.95 | 23.88 |
| AT3G54820.1 | Thale cress | plasma membrane | 26.56 | 23.78 |
| AT5G60660.1 | Thale cress | plasma membrane | 26.95 | 23.71 |
| AT2G37170.2 | Thale cress | plasma membrane | 27.34 | 21.34 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 25.0 | 21.26 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EntrezGene:823898 | ProteinID:AEE78281.1 | ArrayExpress:AT3G47440 | EnsemblPlantsGene:AT3G47440 |
| RefSeq:AT3G47440 | TAIR:AT3G47440 | RefSeq:AT3G47440-TAIR-G | EnsemblPlants:AT3G47440.1 | TAIR:AT3G47440.1 | InterPro:Aquaporin-like |
| InterPro:Aquaporin_transptr | Unigene:At.68441 | EMBL:BX826124 | ProteinID:CAB51216.1 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005773 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009705 | GO:GO:0009987 | GO:GO:0015204 | GO:GO:0015250 | GO:GO:0015267 |
| GO:GO:0015840 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030154 | GO:GO:0034220 | GO:GO:0042807 |
| GO:GO:0048235 | GO:GO:0055085 | GO:GO:0071918 | GO:GO:0090406 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | RefSeq:NP_190328.1 | PFAM:PF00230 | PO:PO:0000084 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF54 | UniProt:Q9STX9 |
| SUPFAM:SSF81338 | Symbol:TIP5;1 | TMHMM:TMhelix | UniParc:UPI00000A71C9 | : | : |
Description
TIP5-1Probable aquaporin TIP5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9STX9]
Coordinates
chr3:+:17481996..17483158
Molecular Weight (calculated)
26644.7 Da
IEP (calculated)
8.449
GRAVY (calculated)
0.747
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRMIPTSFS SKFQGVLSMN ALRCYVSEFI STFFFVLAAV GSVMSSRKLM AGDVSGPFGV LIPAIANALA LSSSVYISWN VSGGHVNPAV TFAMAVAGRI
101: SVPTAMFYWT SQMIASVMAC LVLKVTVMEQ HVPIYKIAGE MTGFGASVLE GVLAFVLVYT VFTASDPRRG LPLAVGPIFI GFVAGANVLA AGPFSGGSMN
201: PACAFGSAMV YGSFKNQAVY WVGPLLGGAT AALVYDNVVV PVEDDRGSST GDAIGV
101: SVPTAMFYWT SQMIASVMAC LVLKVTVMEQ HVPIYKIAGE MTGFGASVLE GVLAFVLVYT VFTASDPRRG LPLAVGPIFI GFVAGANVLA AGPFSGGSMN
201: PACAFGSAMV YGSFKNQAVY WVGPLLGGAT AALVYDNVVV PVEDDRGSST GDAIGV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.