Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07681 | Canola | plasma membrane | 93.43 | 93.75 |
| Bra000111.1-P | Field mustard | plasma membrane | 93.43 | 93.75 |
| CDY14415 | Canola | cytosol, peroxisome, plasma membrane | 93.08 | 93.4 |
| Solyc06g011350.2.1 | Tomato | nucleus | 76.47 | 78.93 |
| AT3G54820.1 | Thale cress | plasma membrane | 77.85 | 78.67 |
| PGSC0003DMT400062174 | Potato | plasma membrane | 77.51 | 78.32 |
| AT2G16850.1 | Thale cress | plasma membrane | 75.09 | 78.06 |
| AT4G35100.1 | Thale cress | plasma membrane | 75.09 | 77.5 |
| AT2G37180.1 | Thale cress | plasma membrane | 75.43 | 76.49 |
| PGSC0003DMT400020870 | Potato | plasma membrane | 75.43 | 75.96 |
| AT3G53420.1 | Thale cress | plasma membrane | 75.43 | 75.96 |
| AT5G60660.1 | Thale cress | plasma membrane | 75.43 | 74.91 |
| Solyc11g069430.1.1 | Tomato | plastid | 74.39 | 74.91 |
| AT2G37170.2 | Thale cress | plasma membrane | 76.82 | 67.68 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 66.09 | 66.78 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 66.09 | 66.55 |
| AT4G23400.1 | Thale cress | plasma membrane | 66.09 | 66.55 |
| AT3G61430.1 | Thale cress | plasma membrane | 65.05 | 65.73 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 60.21 | 57.81 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 32.53 | 37.6 |
| AT3G16240.1 | Thale cress | plasma membrane | 32.18 | 37.2 |
| AT4G01470.1 | Thale cress | cytosol, golgi, plasma membrane | 32.18 | 36.9 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 31.14 | 36.0 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 30.45 | 35.06 |
| AT3G26520.1 | Thale cress | plasma membrane | 30.45 | 34.78 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 28.72 | 33.33 |
| AT1G73190.1 | Thale cress | plasma membrane | 29.76 | 32.09 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 28.37 | 30.71 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 23.88 | 26.95 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 11.42 | 26.61 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | EntrezGene:818487 | UniProt:A0A178VZ30 | ProteinID:AAC79629.1 | ProteinID:AEC09626.1 |
| ArrayExpress:AT2G39010 | EnsemblPlantsGene:AT2G39010 | RefSeq:AT2G39010 | TAIR:AT2G39010 | RefSeq:AT2G39010-TAIR-G | EnsemblPlants:AT2G39010.1 |
| TAIR:AT2G39010.1 | EMBL:AY045690 | EMBL:AY054142 | EMBL:AY057559 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009624 |
| GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | RefSeq:NP_181434.1 | ProteinID:OAP11560.1 | PFAM:PF00230 |
| Symbol:PIP2E | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF167 |
| UniProt:Q9ZV07 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI000009CE17 | SEG:seg |
Description
PIP2-6Probable aquaporin PIP2-6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV07]
Coordinates
chr2:+:16291280..16294101
Molecular Weight (calculated)
31051.7 Da
IEP (calculated)
8.293
GRAVY (calculated)
0.462
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKDELTEEE SLSGKDYLDP PPVKTFEVRE LKKWSFYRAV IAEFIATLLF LYVTVLTVIG FKSQTDINAG GGACASVGLL GISWAFGGMI FILVYCTAGI
101: SGGHINPAVT FGLFLASKVS LVRAVSYMVA QCLGATCGVG LVKVFQSTYY NRYGGGANML SDGYNVGVGV GAEIIGTFVL VYTVFSATDP KRNARDSHIP
201: VLAPLPIGFS VFMVHLATIP ITGTGINPAR SFGAAVIYNN QKAWDDQWIF WVGPFVGAAI AAFYHQFVLR AGAMKAYGSV RSQLHELHA
101: SGGHINPAVT FGLFLASKVS LVRAVSYMVA QCLGATCGVG LVKVFQSTYY NRYGGGANML SDGYNVGVGV GAEIIGTFVL VYTVFSATDP KRNARDSHIP
201: VLAPLPIGFS VFMVHLATIP ITGTGINPAR SFGAAVIYNN QKAWDDQWIF WVGPFVGAAI AAFYHQFVLR AGAMKAYGSV RSQLHELHA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.