Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- golgi 4
- extracellular 3
- vacuole 3
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026245.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 96.8 | 96.8 |
| CDY65121 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 96.8 | 96.8 |
| CDY64499 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 96.4 | 96.4 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 92.0 | 92.0 |
| Solyc06g060760.2.1 | Tomato | endoplasmic reticulum | 84.8 | 84.8 |
| PGSC0003DMT400030994 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 84.8 | 84.8 |
| VIT_00s0229g00130.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 84.0 | 84.0 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 80.4 | 80.72 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 80.0 | 80.32 |
| Zm00001d002738_P001 | Maize | plasma membrane | 78.0 | 78.63 |
| Os02t0658100-01 | Rice | vacuole | 64.4 | 78.16 |
| KXG31086 | Sorghum | golgi, plasma membrane, vacuole | 77.2 | 77.51 |
| Zm00001d017485_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 77.2 | 77.2 |
| EES12617 | Sorghum | plasma membrane | 76.8 | 77.11 |
| TraesCS6A01G250300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 76.8 | 77.11 |
| TraesCS6D01G232100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 76.8 | 77.11 |
| HORVU0Hr1G032130.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 76.4 | 76.71 |
| HORVU6Hr1G062980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 76.4 | 76.71 |
| Zm00001d051362_P001 | Maize | plasma membrane | 76.4 | 76.71 |
| Zm00001d026177_P001 | Maize | extracellular | 76.0 | 76.61 |
| AT3G16240.1 | Thale cress | plasma membrane | 76.4 | 76.4 |
| TraesCS6B01G275100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 75.6 | 75.9 |
| TraesCS2B01G433200.1 | Wheat | plasma membrane | 74.8 | 75.4 |
| TraesCS2D01G411400.1 | Wheat | plasma membrane | 74.8 | 75.4 |
| TraesCS2A01G414100.1 | Wheat | plasma membrane | 74.4 | 75.0 |
| Os04t0550900-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 38.0 | 66.9 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 62.8 | 62.55 |
| AT3G26520.1 | Thale cress | plasma membrane | 61.6 | 60.87 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 28.0 | 56.45 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 53.6 | 53.82 |
| AT4G01470.1 | Thale cress | cytosol, golgi, plasma membrane | 54.0 | 53.57 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 55.2 | 51.69 |
| AT1G73190.1 | Thale cress | plasma membrane | 54.8 | 51.12 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 43.2 | 42.19 |
| AT2G16850.1 | Thale cress | plasma membrane | 36.4 | 32.73 |
| AT4G35100.1 | Thale cress | plasma membrane | 36.4 | 32.5 |
| AT2G39010.1 | Thale cress | plasma membrane | 36.0 | 31.14 |
| AT3G53420.1 | Thale cress | plasma membrane | 35.6 | 31.01 |
| AT5G60660.1 | Thale cress | plasma membrane | 36.0 | 30.93 |
| AT3G54820.1 | Thale cress | plasma membrane | 35.2 | 30.77 |
| AT4G23400.1 | Thale cress | plasma membrane | 35.2 | 30.66 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 34.8 | 30.31 |
| AT2G37180.1 | Thale cress | plasma membrane | 34.4 | 30.18 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 34.4 | 30.07 |
| AT3G61430.1 | Thale cress | plasma membrane | 33.6 | 29.37 |
| AT2G37170.2 | Thale cress | plasma membrane | 34.8 | 26.52 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 29.6 | 24.58 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EntrezGene:827446 | UniProt:A0A178UVY8 | ProteinID:AEE83878.1 | EMBL:AF367283 |
| ArrayExpress:AT4G17340 | EnsemblPlantsGene:AT4G17340 | RefSeq:AT4G17340 | TAIR:AT4G17340 | RefSeq:AT4G17340-TAIR-G | EnsemblPlants:AT4G17340.1 |
| TAIR:AT4G17340.1 | EMBL:AY056063 | EMBL:AY088929 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | ProteinID:CAB10515.1 |
| ProteinID:CAB78737.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 |
| GO:GO:0006833 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009705 | GO:GO:0015250 |
| GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | RefSeq:NP_193465.1 | ProteinID:OAO98099.1 | PFAM:PF00230 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000258 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0003000 | PO:PO:0006036 | PO:PO:0006203 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020121 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF257 | UniProt:Q41975 | SUPFAM:SSF81338 |
| TIGRFAMs:TIGR00861 | Symbol:TIP2;2 | TMHMM:TMhelix | UniParc:UPI00000A479C | EMBL:Z18142 | SEG:seg |
Description
TIP2-2TIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UVY8]
Coordinates
chr4:+:9698940..9700472
Molecular Weight (calculated)
25081.6 Da
IEP (calculated)
4.499
GRAVY (calculated)
1.023
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKIEIGSVG DSFSVASLKA YLSEFIATLL FVFAGVGSAL AFAKLTSDAA LDPAGLVAVA VAHAFALFVG VSIAANISGG HLNPAVTLGL AVGGNITVIT
101: GFFYWIAQCL GSIVACLLLV FVTNGESVPT HGVAAGLGAI EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD FSQIWIYWVG PLVGGALAGL IYGDVFIGSY APAPTTESYP
101: GFFYWIAQCL GSIVACLLLV FVTNGESVPT HGVAAGLGAI EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD FSQIWIYWVG PLVGGALAGL IYGDVFIGSY APAPTTESYP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.