Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- golgi 3
- plasma membrane 5
- endoplasmic reticulum 4
- vacuole 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G17340.1 | EES02290 | AT3G16310.1 | 21798944 |
| AT4G17340.1 | EES19830 | AT3G16310.1 | 21798944 |
| AT4G17340.1 | EES12559 | AT3G60600.1 | 21798944 |
| AT4G17340.1 | EES14570 | AT3G60600.1 | 21798944 |
| AT4G17340.1 | KXG31128 | AT3G60600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002738_P001 | Maize | plasma membrane | 95.58 | 95.97 |
| Zm00001d026177_P001 | Maize | extracellular | 94.78 | 95.16 |
| TraesCS2D01G411400.1 | Wheat | plasma membrane | 90.36 | 90.73 |
| TraesCS2A01G414100.1 | Wheat | plasma membrane | 90.36 | 90.73 |
| TraesCS2B01G433200.1 | Wheat | plasma membrane | 89.16 | 89.52 |
| KXG31086 | Sorghum | golgi, plasma membrane, vacuole | 89.16 | 89.16 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 86.35 | 86.35 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 83.13 | 83.13 |
| Os04t0550900-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 46.99 | 82.39 |
| Solyc06g060760.2.1 | Tomato | endoplasmic reticulum | 81.93 | 81.6 |
| PGSC0003DMT400030994 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 81.93 | 81.6 |
| VIT_00s2783g00010.t01 | Wine grape | extracellular | 39.76 | 79.84 |
| VIT_00s0229g00130.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 79.92 | 79.6 |
| Bra026245.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 77.51 | 77.2 |
| CDY65121 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 77.51 | 77.2 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 77.11 | 76.8 |
| CDY64499 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 77.11 | 76.8 |
| Bra022131.1-P | Field mustard | extracellular | 62.65 | 76.47 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 76.31 | 76.0 |
| CDY51678 | Canola | plasma membrane, vacuole | 75.9 | 75.6 |
| CDY28932 | Canola | endoplasmic reticulum, extracellular, vacuole | 63.45 | 75.24 |
| KRH77347 | Soybean | mitochondrion | 74.7 | 74.7 |
| CDX77768 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 74.7 | 74.1 |
| CDY59296 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 74.7 | 74.1 |
| Bra024943.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 74.3 | 73.71 |
| KRH28112 | Soybean | mitochondrion | 73.49 | 73.49 |
| EER89797 | Sorghum | plasma membrane | 70.28 | 70.56 |
| EER92857 | Sorghum | cytosol | 61.04 | 60.8 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 27.31 | 54.84 |
| EES04303 | Sorghum | cytosol | 55.42 | 53.49 |
| EES02191 | Sorghum | cytosol | 49.8 | 49.21 |
| EES11105 | Sorghum | mitochondrion, plasma membrane | 47.39 | 44.03 |
| EER94020 | Sorghum | golgi, mitochondrion, plasma membrane | 46.99 | 43.98 |
| KXG31483 | Sorghum | extracellular, golgi, plasma membrane | 44.18 | 43.48 |
| OQU82093 | Sorghum | plasma membrane | 45.78 | 42.7 |
| EES17913 | Sorghum | cytosol, plastid | 46.99 | 37.26 |
| EER95659 | Sorghum | mitochondrion | 37.75 | 34.69 |
| EER98457 | Sorghum | plasma membrane | 38.15 | 33.22 |
| EER98453 | Sorghum | plasma membrane | 37.75 | 32.87 |
| EER98452 | Sorghum | plasma membrane | 37.75 | 32.87 |
| EER98454 | Sorghum | plasma membrane | 37.35 | 32.52 |
| OQU91911 | Sorghum | plasma membrane | 36.14 | 31.91 |
| EES11124 | Sorghum | plasma membrane | 37.35 | 31.85 |
| EES05459 | Sorghum | plasma membrane | 36.95 | 31.83 |
| EER98451 | Sorghum | plasma membrane | 36.55 | 31.38 |
| EES11257 | Sorghum | cytosol, peroxisome, plasma membrane | 33.33 | 28.82 |
| EES07484 | Sorghum | plasma membrane | 33.33 | 28.72 |
| EER89434 | Sorghum | peroxisome | 34.14 | 28.72 |
| OQU85985 | Sorghum | cytosol, peroxisome, plasma membrane | 33.33 | 28.62 |
| OQU88961 | Sorghum | plastid | 36.55 | 24.33 |
| KXG36091 | Sorghum | cytosol, peroxisome, plasma membrane | 28.11 | 21.47 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EntrezGene:8055965 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | UniProt:C5YDH5 |
| EnsemblPlants:EES12617 | ProteinID:EES12617 | ProteinID:EES12617.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0015250 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 | InterPro:IPR023271 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF257 | EnsemblPlantsGene:SORBI_3006G170600 | SUPFAM:SSF81338 | unigene:Sbi.18309 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix |
| UniParc:UPI0001A8758D | RefSeq:XP_002448289.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:52722392..52723580
Molecular Weight (calculated)
25132.6 Da
IEP (calculated)
6.672
GRAVY (calculated)
0.863
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKLAFGSLG DSFSAASLKS YVAEFIATLL FVFAGVGSAI AYSQLTKGGA LDPAGLVAIA IAHAFALFVG VSMAANVSGG HLNPAVTFGL AVGGHITILT
101: GIFYWVAQVL GASVACLLLK YVTHGQAIPT HGVSGISEIE GVVMEIVITF ALVYTVYATA ADPKKGSLGT IAPIAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVAAGNF AGNWVYWVGP LIGGGLAGLV YGDVFIASYQ PVGQQDQYP
101: GIFYWVAQVL GASVACLLLK YVTHGQAIPT HGVSGISEIE GVVMEIVITF ALVYTVYATA ADPKKGSLGT IAPIAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVAAGNF AGNWVYWVGP LIGGGLAGLV YGDVFIASYQ PVGQQDQYP
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [golgi,plasma membrane]
SUBAcon: [golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.