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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 5
  • golgi 4
  • plasma membrane 4
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022131.1-P Field mustard extracellular 93.81 96.57
CDY51678 Canola plasma membrane, vacuole 97.62 82.0
AT5G47450.1 Thale cress golgi, plasma membrane 93.33 78.4
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 92.38 77.29
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 91.9 76.89
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 89.05 74.8
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 88.57 74.4
Os02t0658100-01 Rice vacuole 71.9 73.3
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 80.95 68.0
Solyc06g060760.2.1 Tomato endoplasmic reticulum 80.95 68.0
VIT_00s0229g00130.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 78.57 66.0
KRH77347 Soybean mitochondrion 77.14 65.06
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 76.67 64.66
KRH28112 Soybean mitochondrion 76.67 64.66
GSMUA_Achr11P... Banana extracellular, plasma membrane 76.19 64.26
KXG31086 Sorghum golgi, plasma membrane, vacuole 75.71 63.86
Zm00001d051362_P001 Maize plasma membrane 75.71 63.86
Zm00001d002738_P001 Maize plasma membrane 75.24 63.71
Zm00001d026177_P001 Maize extracellular 75.24 63.71
Zm00001d017485_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 75.71 63.6
EES12617 Sorghum plasma membrane 75.24 63.45
TraesCS6A01G250300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 74.76 63.05
TraesCS6B01G275100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 74.76 63.05
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 74.76 63.05
TraesCS2B01G433200.1 Wheat plasma membrane 74.29 62.9
HORVU0Hr1G032130.2 Barley endoplasmic reticulum, plasma membrane, vacuole 74.29 62.65
HORVU6Hr1G062980.1 Barley endoplasmic reticulum, plasma membrane, vacuole 74.29 62.65
TraesCS2A01G414100.1 Wheat plasma membrane 73.81 62.5
TraesCS2D01G411400.1 Wheat plasma membrane 73.81 62.5
CDX82410 Canola plasma membrane 72.86 61.45
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 71.43 60.24
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 71.43 60.24
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 70.95 60.08
CDX97733 Canola endoplasmic reticulum, extracellular 70.48 59.68
CDY66645 Canola plastid 61.9 58.82
CDY67380 Canola plastid 61.9 58.82
CDX75873 Canola extracellular, golgi, vacuole 72.86 55.64
CDX83623 Canola golgi, plasma membrane, plastid 65.24 54.15
CDY13639 Canola plasma membrane 65.24 54.15
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 65.24 54.15
CDY28539 Canola plasma membrane 64.76 53.75
CDY48983 Canola plasma membrane 64.76 53.75
CDY53270 Canola plasma membrane 62.86 52.59
CDY35336 Canola extracellular 32.86 48.25
Os04t0550900-00 Rice endoplasmic reticulum, extracellular, vacuole 30.95 45.77
CDX77009 Canola cytosol, plasma membrane, vacuole 53.33 44.98
CDY07142 Canola cytosol 53.33 44.44
CDY69446 Canola cytosol 53.33 44.44
CDY66321 Canola plasma membrane 53.81 42.48
CDY48045 Canola golgi, mitochondrion, plasma membrane 53.33 42.11
CDX68239 Canola cytosol 52.86 41.89
CDY11123 Canola cytosol 52.86 41.89
CDX72962 Canola plasma membrane 52.38 41.51
CDX96453 Canola cytosol 52.38 41.51
CDX81850 Canola golgi, mitochondrion, plasma membrane 50.95 40.07
CDY21731 Canola golgi, mitochondrion, plasma membrane 50.95 40.07
CDY26214 Canola plasma membrane 50.48 39.7
CDY19176 Canola plasma membrane 50.0 39.33
CDY66912 Canola extracellular 32.38 33.01
CDY47413 Canola mitochondrion, plastid 39.05 31.78
CDY70391 Canola extracellular, golgi 23.81 31.45
CDX99048 Canola mitochondrion, plastid 38.57 31.4
CDX89115 Canola plasma membrane 33.33 31.11
CDX71032 Canola plasma membrane 37.62 30.38
CDX88767 Canola plasma membrane 37.62 30.38
CDX72515 Canola golgi, plasma membrane 36.67 30.32
CDY09192 Canola plasma membrane 37.14 30.12
CDY31523 Canola plasma membrane 37.14 30.0
CDY53629 Canola cytosol 35.71 28.96
CDX69112 Canola plasma membrane 37.14 27.76
CDX76314 Canola cytosol 37.14 27.76
CDY52648 Canola plasma membrane 37.14 27.76
CDY17511 Canola plasma membrane 36.67 27.4
CDX78177 Canola plasma membrane 36.67 26.83
CDY56697 Canola plasma membrane 36.67 26.83
CDY46759 Canola plasma membrane 36.19 26.67
CDX91341 Canola plasma membrane 35.71 26.32
CDX67611 Canola plasma membrane 35.71 26.22
CDY07519 Canola plasma membrane 35.71 26.22
CDY46758 Canola plasma membrane 35.24 26.15
CDY07681 Canola plasma membrane 35.71 26.04
CDY14415 Canola cytosol, peroxisome, plasma membrane 35.71 26.04
CDX91340 Canola plasma membrane 35.24 25.96
CDX90046 Canola cytosol, peroxisome, plasma membrane 35.24 25.87
CDY38017 Canola plasma membrane 35.24 25.87
CDY13298 Canola plasma membrane 35.24 25.78
CDX73446 Canola peroxisome 34.76 25.52
CDX78265 Canola plasma membrane 34.76 25.52
CDY07221 Canola cytosol, peroxisome, plasma membrane 34.76 25.52
CDY51161 Canola cytosol, peroxisome, plasma membrane 34.76 25.52
CDY10936 Canola plasma membrane 34.76 25.44
CDX74334 Canola cytosol, peroxisome, plasma membrane 34.76 25.35
CDX71738 Canola plasma membrane 34.29 25.17
CDX74777 Canola cytosol, peroxisome, plasma membrane 34.29 25.17
CDX83385 Canola cytosol, peroxisome, plasma membrane 34.29 25.17
CDY18886 Canola cytosol, peroxisome, plasma membrane 34.29 25.17
CDY27346 Canola cytosol, peroxisome, plasma membrane 34.29 25.17
CDY37078 Canola cytosol, peroxisome, plasma membrane 34.29 25.17
CDY48920 Canola plasma membrane 34.29 25.17
CDX94185 Canola plasma membrane 34.29 25.09
CDX91911 Canola cytosol, peroxisome, plasma membrane 34.29 25.0
CDX95670 Canola cytosol, peroxisome, plasma membrane 33.81 24.83
CDX74984 Canola cytosol, peroxisome, plasma membrane 35.24 23.87
CDX74983 Canola cytosol, peroxisome, plasma membrane 22.38 23.86
CDY15165 Canola plastid 35.24 22.84
CDY66913 Canola cytosol, mitochondrion, nucleus 1.43 6.52
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3GO:A0A078GUZ7UniProt:A0A078GUZ7InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY28932ProteinID:CDY28932ProteinID:CDY28932.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00041632001InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783
ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF257SUPFAM:SSF81338TMHMM:TMhelixUniParc:UPI0004EF33F0
SEG:seg:::::
Description
BnaA02g25440DBnaA02g25440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUZ7]
Coordinates
chrLK032228:+:120488..129909
Molecular Weight (calculated)
21314.1 Da
IEP (calculated)
4.515
GRAVY (calculated)
0.934
Length
210 amino acids
Sequence
(BLAST)
001: MVKIEVGSVS DSFTGLVAIA VAHAFALFVG VSIAANISGG HLNPAVTLGL AVGGNITLIT GFLYWIAQCL GSIVACLLLV YVTNGESVPT HGVGAGLGAL
101: EGIVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIDFI VGANILAAGP FSGGSMNPAR SFGPAVVSGD LSQIWIYWVG PLVGGGLAGL IYGDVFIGSY
201: QEVETREIRV
Best Arabidopsis Sequence Match ( AT2G36830.1 )
(BLAST)
001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
Arabidopsis Description
TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
SUBAcon: [golgi,plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.