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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 2
  • extracellular 1
  • plasma membrane 3
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 97.75 97.75
CDY26214 Canola plasma membrane 97.38 97.38
CDX81850 Canola golgi, mitochondrion, plasma membrane 95.13 95.13
CDY21731 Canola golgi, mitochondrion, plasma membrane 94.38 94.38
AT1G17810.1 Thale cress cytosol, golgi, plasma membrane 92.51 92.51
CDY66321 Canola plasma membrane 83.9 84.21
CDX68239 Canola cytosol 83.52 84.15
CDY11123 Canola cytosol 83.52 84.15
CDY48045 Canola golgi, mitochondrion, plasma membrane 82.4 82.71
CDX96453 Canola cytosol 82.02 82.64
CDX72962 Canola plasma membrane 81.65 82.26
KRH09321 Soybean cytosol, mitochondrion, plasma membrane 69.66 72.94
KRH38823 Soybean nucleus 68.91 72.16
VIT_16s0039g00220.t01 Wine grape cytosol 68.16 70.27
KRH34280 Soybean endoplasmic reticulum 66.29 69.69
Solyc06g072130.2.1 Tomato extracellular 66.29 68.34
PGSC0003DMT400069330 Potato cytosol 65.92 67.95
KRG92517 Soybean cytosol 64.42 67.72
Solyc03g019820.2.1 Tomato cytosol, golgi, plasma membrane 65.54 67.31
PGSC0003DMT400039507 Potato cytosol, golgi, plasma membrane 65.17 66.92
GSMUA_Achr2P10640_001 Banana cytosol, golgi, plasma membrane 63.3 66.54
GSMUA_Achr4P26010_001 Banana cytosol, golgi, plasma membrane 63.3 66.54
Os10t0492600-01 Rice plastid 61.8 62.5
Zm00001d013956_P003 Maize plasma membrane 60.3 61.45
TraesCS1A01G165400.1 Wheat golgi, mitochondrion, plasma membrane, plastid 60.3 61.22
HORVU1Hr1G043890.2 Barley mitochondrion 59.93 60.84
TraesCS1D01G175200.1 Wheat unclear 59.93 60.84
TraesCS1B01G182200.1 Wheat golgi 59.55 60.46
EER94020 Sorghum golgi, mitochondrion, plasma membrane 59.93 60.15
Zm00001d032610_P003 Maize mitochondrion, plastid 59.93 60.15
CDY07142 Canola cytosol 53.56 56.75
CDY69446 Canola cytosol 53.56 56.75
CDY53270 Canola plasma membrane 52.43 55.78
CDY66645 Canola plastid 46.07 55.66
CDY67380 Canola plastid 46.07 55.66
CDX83623 Canola golgi, plasma membrane, plastid 52.43 55.34
CDY13639 Canola plasma membrane 52.43 55.34
CDY28539 Canola plasma membrane 52.06 54.94
CDY48983 Canola plasma membrane 52.06 54.94
Os04t0527900-01 Rice plastid 53.18 53.58
TraesCS2A01G374400.1 Wheat plasma membrane 52.43 52.83
TraesCS2B01G391400.1 Wheat extracellular, plasma membrane, vacuole 52.43 52.83
TraesCS2D01G370800.1 Wheat plasma membrane 52.43 52.83
Zm00001d002952_P001 Maize plasma membrane 52.06 52.45
EES11105 Sorghum mitochondrion, plasma membrane 52.43 52.24
CDX97733 Canola endoplasmic reticulum, extracellular 47.94 51.61
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 48.69 51.38
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 47.57 51.21
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 47.94 51.2
CDX82410 Canola plasma membrane 47.57 51.0
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 47.57 51.0
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 47.57 51.0
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 47.57 50.8
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 39.33 50.0
CDY51678 Canola plasma membrane, vacuole 46.44 49.6
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 45.32 48.21
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 45.32 48.21
CDX77009 Canola cytosol, plasma membrane, vacuole 44.94 48.19
CDX75873 Canola extracellular, golgi, vacuole 48.31 46.91
CDY35336 Canola extracellular 25.09 46.85
EER95659 Sorghum mitochondrion 44.57 43.91
CDY66912 Canola extracellular 29.21 37.86
CDX99048 Canola mitochondrion, plastid 35.21 36.43
CDY47413 Canola mitochondrion, plastid 35.21 36.43
CDX89115 Canola plasma membrane 29.96 35.56
CDY70391 Canola extracellular, golgi 20.97 35.22
Zm00001d048520_P014 Maize mitochondrion 34.08 33.96
CDX95670 Canola cytosol, peroxisome, plasma membrane 34.08 31.82
CDY07221 Canola cytosol, peroxisome, plasma membrane 34.08 31.82
CDY31523 Canola plasma membrane 30.71 31.54
CDX72515 Canola golgi, plasma membrane 29.96 31.5
CDX71738 Canola plasma membrane 33.71 31.47
CDX74777 Canola cytosol, peroxisome, plasma membrane 33.71 31.47
CDX83385 Canola cytosol, peroxisome, plasma membrane 33.71 31.47
CDY18886 Canola cytosol, peroxisome, plasma membrane 33.71 31.47
CDY27346 Canola cytosol, peroxisome, plasma membrane 33.71 31.47
CDY37078 Canola cytosol, peroxisome, plasma membrane 33.71 31.47
CDY48920 Canola plasma membrane 33.71 31.47
CDY51161 Canola cytosol, peroxisome, plasma membrane 33.71 31.47
CDY09192 Canola plasma membrane 30.34 31.27
CDX74334 Canola cytosol, peroxisome, plasma membrane 33.71 31.25
CDX88767 Canola plasma membrane 30.34 31.15
CDX90046 Canola cytosol, peroxisome, plasma membrane 33.33 31.12
CDX78177 Canola plasma membrane 33.33 31.01
CDX94185 Canola plasma membrane 33.33 31.01
CDY56697 Canola plasma membrane 33.33 31.01
CDX91911 Canola cytosol, peroxisome, plasma membrane 33.33 30.9
CDX71032 Canola plasma membrane 29.96 30.77
CDY38017 Canola plasma membrane 32.96 30.77
CDY10936 Canola plasma membrane 32.96 30.66
CDY13298 Canola plasma membrane 32.96 30.66
CDY17511 Canola plasma membrane 32.21 30.61
CDX91341 Canola plasma membrane 32.58 30.53
CDY53629 Canola cytosol 29.59 30.5
CDY46758 Canola plasma membrane 32.21 30.39
CDX69112 Canola plasma membrane 31.84 30.25
CDX76314 Canola cytosol 31.84 30.25
CDY52648 Canola plasma membrane 31.84 30.25
CDX91340 Canola plasma membrane 32.21 30.18
CDY46759 Canola plasma membrane 32.21 30.18
CDY07681 Canola plasma membrane 31.46 29.17
CDX67611 Canola plasma membrane 31.09 29.02
CDY07519 Canola plasma membrane 31.09 29.02
CDX74983 Canola cytosol, peroxisome, plasma membrane 21.35 28.93
CDY14415 Canola cytosol, peroxisome, plasma membrane 31.09 28.82
CDX78265 Canola plasma membrane 30.71 28.67
CDX73446 Canola peroxisome 30.34 28.32
CDX74984 Canola cytosol, peroxisome, plasma membrane 32.21 27.74
CDY15165 Canola plastid 33.33 27.47
CDY66913 Canola cytosol, mitochondrion, nucleus 0.75 4.35
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3GO:A0A078G1J3UniProt:A0A078G1J3InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY19176ProteinID:CDY19176ProteinID:CDY19176.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00006468001InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783
ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF30SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelix
UniParc:UPI0004EE0526SEG:seg::::
Description
BnaC05g13770DBnaC05g13770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1J3]
Coordinates
chrLK032093:+:13948..15363
Molecular Weight (calculated)
28634.9 Da
IEP (calculated)
6.799
GRAVY (calculated)
0.537
Length
267 amino acids
Sequence
(BLAST)
001: MATYARRTYG FGRADEATHP DSIRATLAEF LSTFVFVFAG EGSILSLDKL YWDTEAHTGT DTPGGLLLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA
101: LIGGRLSVIR AIYYWVAQLL GAILACLLLR LSTNGKRPIG FHVASGVSEL HGLLMEIILT FALVYIFYST VIDPKRGSIG IIAPLAIGLI VGANMLVGGP
201: FDGASMNPAR AFGPSLVGWR WENHWIYWVG PFIGGALAAL IYEYMIIPNV NEPPRHSVHQ PLAPEDY
Best Arabidopsis Sequence Match ( AT1G17810.1 )
(BLAST)
001: MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAG EGSILALDKL YWDTAAHTGT NTPGGLVLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY
Arabidopsis Description
TIP3-2BETA-TIP [Source:UniProtKB/TrEMBL;Acc:A0A178WI57]
SUBAcon: [cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.