Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX91340 | Canola | plasma membrane | 91.94 | 100.0 |
| CDY70391 | Canola | extracellular, golgi | 50.97 | 99.37 |
| Bra005215.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 76.13 | 99.16 |
| CDY46758 | Canola | plasma membrane | 89.68 | 98.23 |
| CDX91341 | Canola | plasma membrane | 90.0 | 97.89 |
| Bra005216.1-P | Field mustard | cytosol, golgi, plasma membrane | 72.9 | 97.84 |
| CDX74983 | Canola | cytosol, peroxisome, plasma membrane | 61.94 | 97.46 |
| CDY46759 | Canola | plasma membrane | 88.06 | 95.79 |
| AT2G37180.1 | Thale cress | plasma membrane | 86.13 | 93.68 |
| CDY56697 | Canola | plasma membrane | 84.19 | 90.94 |
| CDX78177 | Canola | plasma membrane | 83.87 | 90.59 |
| CDY13298 | Canola | plasma membrane | 83.23 | 89.9 |
| CDX71032 | Canola | plasma membrane | 69.35 | 82.69 |
| CDY09192 | Canola | plasma membrane | 69.03 | 82.63 |
| AT2G37170.2 | Thale cress | plasma membrane | 87.1 | 82.32 |
| CDX88767 | Canola | plasma membrane | 69.03 | 82.31 |
| PGSC0003DMT400027154 | Potato | plasma membrane | 74.19 | 81.85 |
| CDY31523 | Canola | plasma membrane | 68.39 | 81.54 |
| Solyc10g084120.1.1 | Tomato | nucleus | 73.55 | 81.14 |
| CDY53629 | Canola | cytosol | 67.74 | 81.08 |
| EER98451 | Sorghum | plasma membrane | 75.81 | 81.03 |
| Zm00001d019563_P006 | Maize | plasma membrane | 75.48 | 80.69 |
| TraesCS2A01G198500.1 | Wheat | plasma membrane | 75.16 | 80.34 |
| TraesCS2D01G206300.1 | Wheat | golgi | 74.84 | 80.0 |
| TraesCS2B01G225900.1 | Wheat | golgi | 74.84 | 80.0 |
| Os07t0448800-01 | Rice | plasma membrane | 74.84 | 80.0 |
| Zm00001d005421_P001 | Maize | plasma membrane | 74.84 | 79.45 |
| CDX67611 | Canola | plasma membrane | 71.94 | 77.97 |
| CDY07519 | Canola | plasma membrane | 71.94 | 77.97 |
| CDX78265 | Canola | plasma membrane | 71.94 | 77.97 |
| CDX73446 | Canola | peroxisome | 71.61 | 77.62 |
| CDX72515 | Canola | golgi, plasma membrane | 63.23 | 77.17 |
| CDX69112 | Canola | plasma membrane | 69.35 | 76.51 |
| CDY52648 | Canola | plasma membrane | 69.35 | 76.51 |
| CDY66912 | Canola | extracellular | 50.65 | 76.21 |
| CDX76314 | Canola | cytosol | 69.03 | 76.16 |
| CDY17511 | Canola | plasma membrane | 68.71 | 75.8 |
| CDY07681 | Canola | plasma membrane | 70.0 | 75.35 |
| CDY14415 | Canola | cytosol, peroxisome, plasma membrane | 69.68 | 75.0 |
| CDX89115 | Canola | plasma membrane | 53.23 | 73.33 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 75.16 | 68.33 |
| CDY10936 | Canola | plasma membrane | 62.58 | 67.6 |
| CDX90046 | Canola | cytosol, peroxisome, plasma membrane | 62.26 | 67.48 |
| CDY51161 | Canola | cytosol, peroxisome, plasma membrane | 62.26 | 67.48 |
| CDX94185 | Canola | plasma membrane | 62.26 | 67.25 |
| CDX83385 | Canola | cytosol, peroxisome, plasma membrane | 61.94 | 67.13 |
| CDY48920 | Canola | plasma membrane | 61.94 | 67.13 |
| CDX71738 | Canola | plasma membrane | 61.94 | 67.13 |
| CDX74777 | Canola | cytosol, peroxisome, plasma membrane | 61.94 | 67.13 |
| CDY38017 | Canola | plasma membrane | 61.94 | 67.13 |
| CDY07221 | Canola | cytosol, peroxisome, plasma membrane | 61.94 | 67.13 |
| CDY18886 | Canola | cytosol, peroxisome, plasma membrane | 61.94 | 67.13 |
| CDX74334 | Canola | cytosol, peroxisome, plasma membrane | 62.26 | 67.01 |
| CDY27346 | Canola | cytosol, peroxisome, plasma membrane | 61.61 | 66.78 |
| CDY37078 | Canola | cytosol, peroxisome, plasma membrane | 61.61 | 66.78 |
| CDX95670 | Canola | cytosol, peroxisome, plasma membrane | 61.61 | 66.78 |
| CDX91911 | Canola | cytosol, peroxisome, plasma membrane | 61.94 | 66.67 |
| CDY15165 | Canola | plastid | 62.26 | 59.57 |
| CDX97733 | Canola | endoplasmic reticulum, extracellular | 30.97 | 38.71 |
| CDY30146 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.97 | 38.71 |
| CDY63821 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.65 | 38.15 |
| CDY20190 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.65 | 38.15 |
| CDX82410 | Canola | plasma membrane | 30.32 | 37.75 |
| CDY07142 | Canola | cytosol | 30.0 | 36.9 |
| CDY69446 | Canola | cytosol | 30.0 | 36.9 |
| CDY47816 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.35 | 35.97 |
| CDY28539 | Canola | plasma membrane | 29.03 | 35.57 |
| CDY48983 | Canola | plasma membrane | 29.03 | 35.57 |
| CDY28932 | Canola | endoplasmic reticulum, extracellular, vacuole | 23.87 | 35.24 |
| CDY35336 | Canola | extracellular | 16.13 | 34.97 |
| CDY13639 | Canola | plasma membrane | 28.39 | 34.78 |
| CDX83623 | Canola | golgi, plasma membrane, plastid | 28.39 | 34.78 |
| CDY66321 | Canola | plasma membrane | 29.68 | 34.59 |
| CDX77009 | Canola | cytosol, plasma membrane, vacuole | 27.74 | 34.54 |
| CDY66645 | Canola | plastid | 24.52 | 34.39 |
| CDY67380 | Canola | plastid | 24.52 | 34.39 |
| CDY64499 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.42 | 34.0 |
| CDY65121 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.42 | 34.0 |
| CDY51678 | Canola | plasma membrane, vacuole | 27.42 | 34.0 |
| CDY59296 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.42 | 33.86 |
| CDY53270 | Canola | plasma membrane | 27.42 | 33.86 |
| CDX77768 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.42 | 33.86 |
| CDY48045 | Canola | golgi, mitochondrion, plasma membrane | 29.03 | 33.83 |
| CDX75873 | Canola | extracellular, golgi, vacuole | 30.0 | 33.82 |
| CDX96453 | Canola | cytosol | 28.39 | 33.21 |
| CDX72962 | Canola | plasma membrane | 28.06 | 32.83 |
| CDX68239 | Canola | cytosol | 28.06 | 32.83 |
| CDY11123 | Canola | cytosol | 28.06 | 32.83 |
| CDY19176 | Canola | plasma membrane | 27.74 | 32.21 |
| CDY26214 | Canola | plasma membrane | 27.74 | 32.21 |
| CDY21731 | Canola | golgi, mitochondrion, plasma membrane | 27.1 | 31.46 |
| CDX81850 | Canola | golgi, mitochondrion, plasma membrane | 26.77 | 31.09 |
| CDX99048 | Canola | mitochondrion, plastid | 23.23 | 27.91 |
| CDY47413 | Canola | mitochondrion, plastid | 22.9 | 27.52 |
| CDY66913 | Canola | cytosol, mitochondrion, nucleus | 3.87 | 26.09 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | GO:A0A078CFT6 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | EnsemblPlants:CDX74984 |
| ProteinID:CDX74984 | ProteinID:CDX74984.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00117000001 | InterPro:IPR023271 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF260 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0004EE6BD5 | SEG:seg | : |
Description
BnaA05g07300D
Coordinates
chrLK031802:+:1777400..1778865
Molecular Weight (calculated)
33062.8 Da
IEP (calculated)
7.913
GRAVY (calculated)
0.429
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKEVEGAEG FASRDYEDPP PTPFFDAEEL TKWSLYRAVI AEFVATLLFL YVTVLTVIGY KISSDTKAGG DECGGVGILG ISWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL VRAVLYMVAQ CLGAICGVGF VKAFQSAYYV RYGGGANSLA DGYSTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: SVGATPNWIC RVHGTLGHYS NHRNVLAPLP IGFAVFMVHL ATIPITGTGI NPARSFGAAV IYNESKPWDD HWIFWVGPFI GAAIAAFYHQ FVLRASGSKS
301: LGSFRSAANV
101: GGHINPAVTF GLFLARKVSL VRAVLYMVAQ CLGAICGVGF VKAFQSAYYV RYGGGANSLA DGYSTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: SVGATPNWIC RVHGTLGHYS NHRNVLAPLP IGFAVFMVHL ATIPITGTGI NPARSFGAAV IYNESKPWDD HWIFWVGPFI GAAIAAFYHQ FVLRASGSKS
301: LGSFRSAANV
001: MAKDVEGPEG FQTRDYEDPP PTPFFDADEL TKWSLYRAVI AEFVATLLFL YITVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [golgi,plasma membrane,peroxisome]
SUBAcon: [golgi,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.