Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74983 | Canola | cytosol, peroxisome, plasma membrane | 68.77 | 99.49 |
| CDY70391 | Canola | extracellular, golgi | 55.09 | 98.74 |
| CDX91340 | Canola | plasma membrane | 97.89 | 97.89 |
| CDY46758 | Canola | plasma membrane | 96.84 | 97.53 |
| AT2G37180.1 | Thale cress | plasma membrane | 94.74 | 94.74 |
| CDY46759 | Canola | plasma membrane | 94.74 | 94.74 |
| CDY56697 | Canola | plasma membrane | 91.93 | 91.29 |
| CDX78177 | Canola | plasma membrane | 91.58 | 90.94 |
| CDX74984 | Canola | cytosol, peroxisome, plasma membrane | 97.89 | 90.0 |
| CDY13298 | Canola | plasma membrane | 90.53 | 89.9 |
| CDX71032 | Canola | plasma membrane | 75.44 | 82.69 |
| CDY09192 | Canola | plasma membrane | 75.09 | 82.63 |
| AT2G37170.2 | Thale cress | plasma membrane | 95.09 | 82.62 |
| CDX88767 | Canola | plasma membrane | 75.09 | 82.31 |
| CDY31523 | Canola | plasma membrane | 74.39 | 81.54 |
| CDY53629 | Canola | cytosol | 73.68 | 81.08 |
| PGSC0003DMT400027154 | Potato | plasma membrane | 79.65 | 80.78 |
| EER98451 | Sorghum | plasma membrane | 81.75 | 80.34 |
| Os07t0448800-01 | Rice | plasma membrane | 81.75 | 80.34 |
| Solyc10g084120.1.1 | Tomato | nucleus | 78.95 | 80.07 |
| Zm00001d019563_P006 | Maize | plasma membrane | 81.4 | 80.0 |
| TraesCS2A01G198500.1 | Wheat | plasma membrane | 81.05 | 79.66 |
| TraesCS2D01G206300.1 | Wheat | golgi | 80.7 | 79.31 |
| TraesCS2B01G225900.1 | Wheat | golgi | 80.7 | 79.31 |
| Zm00001d005421_P001 | Maize | plasma membrane | 80.7 | 78.77 |
| CDX67611 | Canola | plasma membrane | 77.89 | 77.62 |
| CDY07519 | Canola | plasma membrane | 77.89 | 77.62 |
| CDX78265 | Canola | plasma membrane | 77.54 | 77.27 |
| CDX73446 | Canola | peroxisome | 77.19 | 76.92 |
| CDX72515 | Canola | golgi, plasma membrane | 67.72 | 75.98 |
| CDY66912 | Canola | extracellular | 54.39 | 75.24 |
| CDX69112 | Canola | plasma membrane | 74.04 | 75.09 |
| CDY52648 | Canola | plasma membrane | 74.04 | 75.09 |
| CDX76314 | Canola | cytosol | 73.68 | 74.73 |
| CDY07681 | Canola | plasma membrane | 75.44 | 74.65 |
| CDY17511 | Canola | plasma membrane | 73.33 | 74.38 |
| CDY14415 | Canola | cytosol, peroxisome, plasma membrane | 74.39 | 73.61 |
| CDX89115 | Canola | plasma membrane | 56.84 | 72.0 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 81.05 | 67.74 |
| CDX83385 | Canola | cytosol, peroxisome, plasma membrane | 67.02 | 66.78 |
| CDX74777 | Canola | cytosol, peroxisome, plasma membrane | 67.02 | 66.78 |
| CDY18886 | Canola | cytosol, peroxisome, plasma membrane | 67.02 | 66.78 |
| CDY10936 | Canola | plasma membrane | 67.02 | 66.55 |
| CDX94185 | Canola | plasma membrane | 67.02 | 66.55 |
| CDY37078 | Canola | cytosol, peroxisome, plasma membrane | 66.67 | 66.43 |
| CDY51161 | Canola | cytosol, peroxisome, plasma membrane | 66.67 | 66.43 |
| CDX90046 | Canola | cytosol, peroxisome, plasma membrane | 66.67 | 66.43 |
| CDY27346 | Canola | cytosol, peroxisome, plasma membrane | 66.67 | 66.43 |
| CDX95670 | Canola | cytosol, peroxisome, plasma membrane | 66.67 | 66.43 |
| CDY38017 | Canola | plasma membrane | 66.32 | 66.08 |
| CDX71738 | Canola | plasma membrane | 66.32 | 66.08 |
| CDY48920 | Canola | plasma membrane | 66.32 | 66.08 |
| CDY07221 | Canola | cytosol, peroxisome, plasma membrane | 66.32 | 66.08 |
| CDX74334 | Canola | cytosol, peroxisome, plasma membrane | 66.67 | 65.97 |
| CDX91911 | Canola | cytosol, peroxisome, plasma membrane | 66.32 | 65.62 |
| CDY15165 | Canola | plastid | 67.02 | 58.95 |
| CDY30146 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 34.04 | 39.11 |
| CDX97733 | Canola | endoplasmic reticulum, extracellular | 34.04 | 39.11 |
| CDY63821 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 33.68 | 38.55 |
| CDY20190 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 33.68 | 38.55 |
| CDX82410 | Canola | plasma membrane | 33.33 | 38.15 |
| CDY69446 | Canola | cytosol | 32.63 | 36.9 |
| CDY07142 | Canola | cytosol | 32.63 | 36.9 |
| CDY28932 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.32 | 35.71 |
| CDY28539 | Canola | plasma membrane | 31.58 | 35.57 |
| CDY47816 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 31.58 | 35.57 |
| CDY48983 | Canola | plasma membrane | 31.58 | 35.57 |
| CDY35336 | Canola | extracellular | 17.54 | 34.97 |
| CDY67380 | Canola | plastid | 27.02 | 34.84 |
| CDY66645 | Canola | plastid | 27.02 | 34.84 |
| CDX83623 | Canola | golgi, plasma membrane, plastid | 30.88 | 34.78 |
| CDY13639 | Canola | plasma membrane | 30.88 | 34.78 |
| CDY66321 | Canola | plasma membrane | 32.28 | 34.59 |
| CDX77009 | Canola | cytosol, plasma membrane, vacuole | 30.18 | 34.54 |
| CDY65121 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.18 | 34.4 |
| CDY51678 | Canola | plasma membrane, vacuole | 30.18 | 34.4 |
| CDY64499 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.18 | 34.4 |
| CDY59296 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.18 | 34.26 |
| CDX77768 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.18 | 34.26 |
| CDY53270 | Canola | plasma membrane | 30.18 | 34.26 |
| CDX75873 | Canola | extracellular, golgi, vacuole | 32.98 | 34.18 |
| CDY48045 | Canola | golgi, mitochondrion, plasma membrane | 31.58 | 33.83 |
| CDX96453 | Canola | cytosol | 30.88 | 33.21 |
| CDX72962 | Canola | plasma membrane | 30.53 | 32.83 |
| CDX68239 | Canola | cytosol | 30.53 | 32.83 |
| CDY11123 | Canola | cytosol | 30.53 | 32.83 |
| CDY19176 | Canola | plasma membrane | 30.53 | 32.58 |
| CDY26214 | Canola | plasma membrane | 30.18 | 32.21 |
| CDY21731 | Canola | golgi, mitochondrion, plasma membrane | 29.82 | 31.84 |
| CDX81850 | Canola | golgi, mitochondrion, plasma membrane | 29.47 | 31.46 |
| CDX99048 | Canola | mitochondrion, plastid | 25.26 | 27.91 |
| CDY47413 | Canola | mitochondrion, plastid | 24.91 | 27.52 |
| CDY66913 | Canola | cytosol, mitochondrion, nucleus | 3.86 | 23.91 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | GO:A0A078DQ10 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | EnsemblPlants:CDX91341 |
| ProteinID:CDX91341 | ProteinID:CDX91341.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00152625001 | InterPro:IPR023271 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF260 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI0001B34E71 | SEG:seg |
Description
BnaC04g08090D
Coordinates
chrLK031867:+:116935..118457
Molecular Weight (calculated)
30287.6 Da
IEP (calculated)
7.494
GRAVY (calculated)
0.524
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDVEGAEG FAARDYEDPP PTPFFDAEEL TKWSLYRAVI AEFVATLLFL YVTVLTVIGY KISSDTKAGG DECGGVGILG ISWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYV RYGGGANSLA DGYSTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIFNES KPWNDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYV RYGGGANSLA DGYSTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIFNES KPWNDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.