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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82410 Canola plasma membrane 81.42 82.73
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 80.63 81.93
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 80.24 81.85
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 80.24 81.53
CDX97733 Canola endoplasmic reticulum, extracellular 79.84 81.45
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid, vacuole 72.33 75.31
Solyc12g044330.1.1 Tomato plastid 73.52 75.0
KRH09912 Soybean endoplasmic reticulum, plasma membrane, vacuole 73.12 74.9
CDX75873 Canola extracellular, golgi, vacuole 81.03 74.55
KRG93712 Soybean plasma membrane, vacuole 69.57 74.26
KRH23420 Soybean plasma membrane, vacuole 71.94 73.68
GSMUA_Achr6P05830_001 Banana endoplasmic reticulum, extracellular, plasma membrane 70.36 72.65
PGSC0003DMT400006558 Potato endoplasmic reticulum, plasma membrane 71.15 72.29
GSMUA_Achr9P28940_001 Banana plasma membrane 69.17 71.43
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 68.38 69.2
VIT_09s0002g04020.t01 Wine grape plasma membrane, vacuole 67.98 69.08
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 67.98 68.8
Solyc06g066560.1.1 Tomato mitochondrion 73.91 68.5
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 66.8 67.33
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 66.8 67.33
CDY51678 Canola plasma membrane, vacuole 66.4 67.2
Os06t0336200-01 Rice nucleus 65.61 66.94
EER89797 Sorghum plasma membrane 64.43 65.73
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 54.15 65.24
TraesCS7B01G243000.1 Wheat plasma membrane 63.64 64.92
HORVU7Hr1G081770.8 Barley plasma membrane 63.64 64.66
TraesCS7A01G331300.1 Wheat unclear 63.24 64.52
CDY66645 Canola plastid 54.15 61.99
CDY67380 Canola plastid 54.15 61.99
CDY48983 Canola plasma membrane 61.26 61.26
CDY28539 Canola plasma membrane 61.26 61.26
CDY13639 Canola plasma membrane 60.47 60.47
CDX83623 Canola golgi, plasma membrane, plastid 60.08 60.08
CDY53270 Canola plasma membrane 57.71 58.17
TraesCS7D01G339600.1 Wheat plasma membrane 63.64 57.71
CDY69446 Canola cytosol 53.36 53.57
CDY07142 Canola cytosol 53.36 53.57
CDY35336 Canola extracellular 30.04 53.15
CDX77009 Canola cytosol, plasma membrane, vacuole 51.38 52.21
CDY66321 Canola plasma membrane 53.36 50.75
CDX68239 Canola cytosol 52.57 50.19
CDY11123 Canola cytosol 52.57 50.19
CDY48045 Canola golgi, mitochondrion, plasma membrane 52.57 50.0
CDX72962 Canola plasma membrane 52.17 49.81
CDX96453 Canola cytosol 52.17 49.81
CDY21731 Canola golgi, mitochondrion, plasma membrane 52.17 49.44
CDX81850 Canola golgi, mitochondrion, plasma membrane 52.17 49.44
CDY19176 Canola plasma membrane 51.38 48.69
CDY26214 Canola plasma membrane 51.38 48.69
CDY47413 Canola mitochondrion, plastid 38.74 37.98
CDX99048 Canola mitochondrion, plastid 38.74 37.98
CDY66912 Canola extracellular 28.46 34.95
CDX72515 Canola golgi, plasma membrane 34.78 34.65
CDY70391 Canola extracellular, golgi 21.74 34.59
CDX89115 Canola plasma membrane 30.04 33.78
CDY17511 Canola plasma membrane 36.76 33.1
CDX76314 Canola cytosol 36.76 33.1
CDY52648 Canola plasma membrane 36.76 33.1
CDX69112 Canola plasma membrane 36.76 33.1
CDY14415 Canola cytosol, peroxisome, plasma membrane 36.76 32.29
CDY07681 Canola plasma membrane 36.76 32.29
CDY46758 Canola plasma membrane 35.97 32.16
CDX78177 Canola plasma membrane 36.36 32.06
CDY56697 Canola plasma membrane 36.36 32.06
CDY09192 Canola plasma membrane 32.81 32.05
CDX91340 Canola plasma membrane 35.97 31.93
CDY07519 Canola plasma membrane 35.97 31.82
CDX67611 Canola plasma membrane 35.97 31.82
CDX91341 Canola plasma membrane 35.57 31.58
CDY31523 Canola plasma membrane 32.41 31.54
CDY46759 Canola plasma membrane 35.18 31.23
CDX71032 Canola plasma membrane 32.02 31.15
CDY13298 Canola plasma membrane 35.18 31.01
CDX73446 Canola peroxisome 34.78 30.77
CDX88767 Canola plasma membrane 31.62 30.77
CDX78265 Canola plasma membrane 34.78 30.77
CDY53629 Canola cytosol 31.23 30.5
CDX83385 Canola cytosol, peroxisome, plasma membrane 34.39 30.42
CDX74777 Canola cytosol, peroxisome, plasma membrane 34.39 30.42
CDY27346 Canola cytosol, peroxisome, plasma membrane 34.39 30.42
CDY18886 Canola cytosol, peroxisome, plasma membrane 34.39 30.42
CDX95670 Canola cytosol, peroxisome, plasma membrane 34.39 30.42
CDY37078 Canola cytosol, peroxisome, plasma membrane 34.39 30.42
CDY48920 Canola plasma membrane 33.99 30.07
CDX71738 Canola plasma membrane 33.99 30.07
CDX74983 Canola cytosol, peroxisome, plasma membrane 23.32 29.95
CDY51161 Canola cytosol, peroxisome, plasma membrane 33.6 29.72
CDX90046 Canola cytosol, peroxisome, plasma membrane 33.6 29.72
CDY07221 Canola cytosol, peroxisome, plasma membrane 33.6 29.72
CDY10936 Canola plasma membrane 33.6 29.62
CDX94185 Canola plasma membrane 33.6 29.62
CDX74334 Canola cytosol, peroxisome, plasma membrane 33.6 29.51
CDX91911 Canola cytosol, peroxisome, plasma membrane 33.6 29.51
CDY38017 Canola plasma membrane 33.2 29.37
CDX74984 Canola cytosol, peroxisome, plasma membrane 35.97 29.35
CDY15165 Canola plastid 33.6 26.23
CDY66913 Canola cytosol, mitochondrion, nucleus 1.19 6.52
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3GO:A0A078ID51UniProt:A0A078ID51InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY47816ProteinID:CDY47816ProteinID:CDY47816.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00088275001InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783
ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelix
UniParc:UPI00019D3409SEG:seg::::
Description
BnaC06g05270DBnaC06g05270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ID51]
Coordinates
chrLK032739:+:29716..30898
Molecular Weight (calculated)
25618.3 Da
IEP (calculated)
5.886
GRAVY (calculated)
0.915
Length
253 amino acids
Sequence
(BLAST)
001: MAGIDFSCED SFKLVSLKAY LAEFISTLLF VFAGVGSAIA FGKLTNNAAL DAPGLVAIAV CHGFALFVAV SIAANHSGGH VNPAVTFGLV LGGKLKIVTG
101: VCYWVAQLLG STAACFLLKF VTGGLAIPIH SVAAGVGSTE GVVMEIIITF ALVYTVYATA VDPKNGTLGI IAPLAIGLIV GANILAAGPF SGGSMNPARS
201: FGPALVAGDF SGHWVYWVGP LVGGGLAGVI YSNAFIAESN QETESEHVPL ISA
Best Arabidopsis Sequence Match ( AT2G36830.1 )
(BLAST)
001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
Arabidopsis Description
TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.