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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74777 Canola cytosol, peroxisome, plasma membrane 99.65 99.65
CDX83385 Canola cytosol, peroxisome, plasma membrane 99.3 99.3
CDY27346 Canola cytosol, peroxisome, plasma membrane 99.3 99.3
CDY37078 Canola cytosol, peroxisome, plasma membrane 99.3 99.3
CDX95670 Canola cytosol, peroxisome, plasma membrane 98.6 98.6
CDX89115 Canola plasma membrane 76.92 97.78
CDX71738 Canola plasma membrane 96.85 96.85
CDY48920 Canola plasma membrane 96.5 96.5
CDY66912 Canola extracellular 69.23 96.12
CDY66913 Canola cytosol, mitochondrion, nucleus 15.38 95.65
CDX90046 Canola cytosol, peroxisome, plasma membrane 93.71 93.71
CDY51161 Canola cytosol, peroxisome, plasma membrane 93.71 93.71
CDX74334 Canola cytosol, peroxisome, plasma membrane 94.06 93.4
CDY38017 Canola plasma membrane 93.36 93.36
CDX91911 Canola cytosol, peroxisome, plasma membrane 93.71 93.06
CDY07221 Canola cytosol, peroxisome, plasma membrane 93.01 93.01
CDY10936 Canola plasma membrane 91.61 91.29
CDX94185 Canola plasma membrane 90.91 90.59
VIT_13s0067g00220.t01 Wine grape plasma membrane 88.46 88.46
GSMUA_AchrUn_... Banana extracellular 58.74 88.42
GSMUA_Achr5P12400_001 Banana extracellular 58.39 87.89
PGSC0003DMT400000151 Potato cytosol, peroxisome, plasma membrane 86.71 87.02
Solyc01g094690.2.1 Tomato nucleus 86.71 87.02
Os04t0559700-01 Rice plasma membrane 87.41 86.81
KRH59918 Soybean peroxisome 87.06 86.76
TraesCS6B01G398000.1 Wheat extracellular 38.81 86.72
AT2G45960.3 Thale cress golgi, peroxisome, plasma membrane 91.26 86.71
KRH66037 Soybean golgi, peroxisome, plasma membrane 86.01 86.62
TraesCS6B01G279200.1 Wheat plastid 87.76 86.55
PGSC0003DMT400014809 Potato peroxisome 86.71 86.41
Solyc08g008050.2.1 Tomato peroxisome 86.71 86.41
KRH77555 Soybean plasma membrane 86.36 86.36
KRH27918 Soybean plasma membrane 86.01 86.01
EES07484 Sorghum plasma membrane 86.71 85.81
KRH41192 Soybean endoplasmic reticulum 86.71 85.81
Zm00001d017526_P001 Maize plasma membrane 86.71 85.81
TraesCS6D01G227500.1 Wheat golgi 86.71 85.52
Os02t0666200-01 Rice plasma membrane 86.36 85.47
Solyc12g056220.1.1 Tomato plastid 86.01 85.42
TraesCS2B01G425600.1 Wheat golgi, plasma membrane 86.01 85.42
Zm00001d002690_P001 Maize plasma membrane 86.01 85.42
Zm00001d051403_P001 Maize plasma membrane 87.06 85.27
HORVU6Hr1G064140.1 Barley golgi, peroxisome, plasma membrane 86.36 85.17
EES11257 Sorghum cytosol, peroxisome, plasma membrane 85.66 85.07
PGSC0003DMT400012780 Potato cytosol, peroxisome, plasma membrane 85.66 85.07
PGSC0003DMT400032134 Potato cytosol, peroxisome, plasma membrane 84.97 84.97
GSMUA_Achr8P11540_001 Banana extracellular 56.29 84.74
PGSC0003DMT400053479 Potato plasma membrane 84.27 84.27
Solyc08g081190.2.1 Tomato plastid 84.27 84.27
GSMUA_AchrUn_... Banana extracellular 55.94 84.21
TraesCS6B01G450000.1 Wheat unclear 85.66 83.9
TraesCS6D01G389400.1 Wheat plasma membrane 85.66 83.9
TraesCS6D01G389500.1 Wheat plasma membrane 85.66 83.9
TraesCS2B01G605900.1 Wheat golgi, peroxisome, plasma membrane 84.62 83.74
Solyc03g096290.2.1 Tomato nucleus 83.57 83.57
TraesCS6B01G450200.1 Wheat plastid 85.31 83.56
TraesCS5B01G178700.1 Wheat plasma membrane 84.97 83.22
TraesCS5D01G185400.1 Wheat plasma membrane 84.97 83.22
KRH00178 Soybean golgi, peroxisome, plasma membrane 83.22 82.93
CDY15165 Canola plastid 93.71 82.72
Zm00001d051872_P001 Maize plasma membrane 83.22 82.64
OQU85985 Sorghum cytosol, peroxisome, plasma membrane 82.52 81.38
HORVU5Hr1G055200.4 Barley golgi, plastid 84.62 77.81
EER89434 Sorghum peroxisome 79.72 77.03
TraesCS2D01G404800.2 Wheat golgi, peroxisome, plasma membrane 79.37 72.29
CDY70391 Canola extracellular, golgi 39.16 70.44
CDX69112 Canola plasma membrane 67.83 69.04
CDY52648 Canola plasma membrane 67.83 69.04
CDX76314 Canola cytosol 67.48 68.68
CDX67611 Canola plasma membrane 68.53 68.53
CDY07519 Canola plasma membrane 68.53 68.53
CDY17511 Canola plasma membrane 67.13 68.33
CDX78177 Canola plasma membrane 67.83 67.6
CDY56697 Canola plasma membrane 67.83 67.6
CDY09192 Canola plasma membrane 61.19 67.57
CDY46758 Canola plasma membrane 66.78 67.49
CDX78265 Canola plasma membrane 67.48 67.48
CDX91340 Canola plasma membrane 67.13 67.37
CDY46759 Canola plasma membrane 67.13 67.37
CDX71032 Canola plasma membrane 61.19 67.31
CDY13298 Canola plasma membrane 67.48 67.25
CDX73446 Canola peroxisome 67.13 67.13
CDX91341 Canola plasma membrane 66.78 67.02
CDX88767 Canola plasma membrane 60.84 66.92
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 67.48 66.78
CDX72515 Canola golgi, plasma membrane 59.09 66.54
CDX74983 Canola cytosol, peroxisome, plasma membrane 45.8 66.5
CDY31523 Canola plasma membrane 60.14 66.15
CDY53629 Canola cytosol 59.44 65.64
CDY14415 Canola cytosol, peroxisome, plasma membrane 66.08 65.62
KRH75838 Soybean golgi, peroxisome, plasma membrane 83.22 65.56
CDY07681 Canola plasma membrane 65.73 65.28
CDX74984 Canola cytosol, peroxisome, plasma membrane 67.13 61.94
CDX97733 Canola endoplasmic reticulum, extracellular 31.82 36.69
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 31.82 36.69
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 31.82 36.55
CDX82410 Canola plasma membrane 31.47 36.14
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 31.47 36.14
CDY66321 Canola plasma membrane 32.52 34.96
CDY07142 Canola cytosol 30.77 34.92
CDY69446 Canola cytosol 30.77 34.92
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 30.42 34.39
CDX68239 Canola cytosol 31.82 34.34
CDY11123 Canola cytosol 31.82 34.34
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 25.17 34.29
CDY48045 Canola golgi, mitochondrion, plasma membrane 31.82 34.21
CDX77009 Canola cytosol, plasma membrane, vacuole 29.37 33.73
CDY19176 Canola plasma membrane 31.47 33.71
CDY26214 Canola plasma membrane 31.47 33.71
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 29.37 33.6
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 29.37 33.6
CDX96453 Canola cytosol 31.12 33.58
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 29.37 33.47
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 29.37 33.47
CDX72962 Canola plasma membrane 30.77 33.21
CDY66645 Canola plastid 25.52 33.03
CDY67380 Canola plastid 25.52 33.03
CDX81850 Canola golgi, mitochondrion, plasma membrane 30.77 32.96
CDY21731 Canola golgi, mitochondrion, plasma membrane 30.77 32.96
CDY35336 Canola extracellular 16.43 32.87
CDY53270 Canola plasma membrane 28.67 32.67
CDY28539 Canola plasma membrane 28.67 32.41
CDY48983 Canola plasma membrane 28.67 32.41
CDY51678 Canola plasma membrane, vacuole 28.32 32.4
CDX75873 Canola extracellular, golgi, vacuole 31.12 32.36
CDX83623 Canola golgi, plasma membrane, plastid 28.32 32.02
CDY13639 Canola plasma membrane 28.32 32.02
CDY47413 Canola mitochondrion, plastid 26.22 29.07
CDX99048 Canola mitochondrion, plastid 25.87 28.68
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2GO:A0A078G0R2UniProt:A0A078G0R2InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY18886ProteinID:CDY18886ProteinID:CDY18886.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005886GO:GO:0006810
GO:GO:0006833GO:GO:0006950GO:GO:0008150GO:GO:0009414GO:GO:0009507GO:GO:0009536
GO:GO:0009628GO:GO:0009651GO:GO:0015250GO:GO:0015267GO:GO:0015670GO:GO:0016020
GO:GO:0016021GO:GO:0046658GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00006075001InterPro:IPR023271InterPro:MIP
InterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF202
SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI00000A19B0::
Description
BnaC04g04640DBnaC04g04640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0R2]
Coordinates
chrLK032090:-:144845..146479
Molecular Weight (calculated)
30585.3 Da
IEP (calculated)
9.325
GRAVY (calculated)
0.404
Length
286 amino acids
Sequence
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPLF EPGELASWSF WRAGIAEFIA TFLFLYITVL TVMGVKRSPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVYYIVMQC LGAICGAGVV KGFQPKQYQA LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: NARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIFNKDN AWDDHWVFWV GPFIGAALAA LYHVIVIRAI PFKSRS
Best Arabidopsis Sequence Match ( AT2G45960.1 )
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPLF EPGELASWSF WRAGIAEFIA TFLFLYITVL TVMGVKRSPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVYYIVMQC LGAICGAGVV KGFQPKQYQA LGGGANTIAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: NARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIFNKDN AWDDHWVFWV GPFIGAALAA LYHVIVIRAI PFKSRS
Arabidopsis Description
PIP1BPlasma membrane intrinsic protein 1B [Source:UniProtKB/TrEMBL;Acc:A8MRW1]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.