Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051872_P001 | Maize | plasma membrane | 95.52 | 96.18 |
| EES11257 | Sorghum | cytosol, peroxisome, plasma membrane | 90.0 | 90.62 |
| EES07484 | Sorghum | plasma membrane | 88.97 | 89.27 |
| CDX89115 | Canola | plasma membrane | 66.21 | 85.33 |
| Solyc03g096290.2.1 | Tomato | nucleus | 84.14 | 85.31 |
| CDY66912 | Canola | extracellular | 60.0 | 84.47 |
| Solyc01g094690.2.1 | Tomato | nucleus | 82.76 | 84.21 |
| CDX83385 | Canola | cytosol, peroxisome, plasma membrane | 82.07 | 83.22 |
| AT4G23400.1 | Thale cress | plasma membrane | 82.07 | 82.93 |
| CDX74777 | Canola | cytosol, peroxisome, plasma membrane | 81.72 | 82.87 |
| CDX95670 | Canola | cytosol, peroxisome, plasma membrane | 81.72 | 82.87 |
| CDY38017 | Canola | plasma membrane | 81.72 | 82.87 |
| CDY48920 | Canola | plasma membrane | 81.38 | 82.52 |
| CDY37078 | Canola | cytosol, peroxisome, plasma membrane | 81.38 | 82.52 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 81.38 | 82.52 |
| CDY27346 | Canola | cytosol, peroxisome, plasma membrane | 81.38 | 82.52 |
| CDY18886 | Canola | cytosol, peroxisome, plasma membrane | 81.38 | 82.52 |
| AT3G61430.1 | Thale cress | plasma membrane | 81.38 | 82.52 |
| CDX71738 | Canola | plasma membrane | 81.38 | 82.52 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 81.38 | 82.23 |
| CDX90046 | Canola | cytosol, peroxisome, plasma membrane | 81.03 | 82.17 |
| CDY51161 | Canola | cytosol, peroxisome, plasma membrane | 81.03 | 82.17 |
| Solyc08g081190.2.1 | Tomato | plastid | 81.03 | 82.17 |
| Solyc12g056220.1.1 | Tomato | plastid | 81.38 | 81.94 |
| CDY10936 | Canola | plasma membrane | 81.03 | 81.88 |
| Solyc08g008050.2.1 | Tomato | peroxisome | 81.03 | 81.88 |
| CDY07221 | Canola | cytosol, peroxisome, plasma membrane | 80.69 | 81.82 |
| CDX74334 | Canola | cytosol, peroxisome, plasma membrane | 81.03 | 81.6 |
| CDX91911 | Canola | cytosol, peroxisome, plasma membrane | 80.69 | 81.25 |
| CDX94185 | Canola | plasma membrane | 80.0 | 80.84 |
| EER89434 | Sorghum | peroxisome | 80.34 | 78.72 |
| Bra039301.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 71.38 | 73.93 |
| CDY66913 | Canola | cytosol, mitochondrion, nucleus | 11.72 | 73.91 |
| CDY15165 | Canola | plastid | 81.38 | 72.84 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 74.48 | 71.76 |
| KRG97766 | Soybean | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 32.76 | 70.9 |
| EER98453 | Sorghum | plasma membrane | 66.9 | 67.83 |
| EER98457 | Sorghum | plasma membrane | 66.55 | 67.48 |
| EER98454 | Sorghum | plasma membrane | 66.55 | 67.48 |
| EER98452 | Sorghum | plasma membrane | 66.55 | 67.48 |
| EES11124 | Sorghum | plasma membrane | 66.21 | 65.75 |
| EES05459 | Sorghum | plasma membrane | 65.52 | 65.74 |
| EER98451 | Sorghum | plasma membrane | 65.52 | 65.52 |
| OQU91911 | Sorghum | plasma membrane | 63.45 | 65.25 |
| PGSC0003DMT400064008 | Potato | extracellular | 23.1 | 59.82 |
| VIT_18s0001g06480.t01 | Wine grape | cytosol, extracellular, vacuole | 26.9 | 55.32 |
| VIT_12s0034g00250.t01 | Wine grape | cytosol, extracellular, plastid | 21.03 | 51.26 |
| OQU88961 | Sorghum | plastid | 64.48 | 50.0 |
| KXG36091 | Sorghum | cytosol, peroxisome, plasma membrane | 46.9 | 41.72 |
| EER89797 | Sorghum | plasma membrane | 28.62 | 33.47 |
| EES12617 | Sorghum | plasma membrane | 28.62 | 33.33 |
| EER92857 | Sorghum | cytosol | 27.93 | 32.4 |
| KXG31086 | Sorghum | golgi, plasma membrane, vacuole | 27.59 | 32.13 |
| EES02191 | Sorghum | cytosol | 27.24 | 31.35 |
| EES04303 | Sorghum | cytosol | 27.24 | 30.62 |
| EER94020 | Sorghum | golgi, mitochondrion, plasma membrane | 27.93 | 30.45 |
| EES11105 | Sorghum | mitochondrion, plasma membrane | 27.93 | 30.22 |
| OQU82093 | Sorghum | plasma membrane | 25.17 | 27.34 |
| EER95659 | Sorghum | mitochondrion | 25.52 | 27.31 |
| KXG31483 | Sorghum | extracellular, golgi, plasma membrane | 22.41 | 25.69 |
| EES17913 | Sorghum | cytosol, plastid | 24.14 | 22.29 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | EntrezGene:8059708 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | UniProt:C5XW23 |
| ProteinID:EES06048.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0015250 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | EnsemblPlants:OQU85985 | ProteinID:OQU85985 | ProteinID:OQU85985.1 | ProteinID:OQU85986.1 | PFAM:PF00230 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF262 | EnsemblPlantsGene:SORBI_3004G351200 | SUPFAM:SSF81338 |
| unigene:Sbi.14492 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI0001A85CB1 | RefSeq:XP_002453072.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:67979891..67983213
Molecular Weight (calculated)
30791.4 Da
IEP (calculated)
8.576
GRAVY (calculated)
0.377
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKEEDVRL GANRYSERQP IGTAAQGTEE NSKDYKEPPA APLFEAEELT SWSLYRAGIA EFVATFLFLY ISILTVMGVS KSGSKCGTVG IQGIAWSFGG
101: MIFALVYCTA GISGGHINPA VTFGLLLARK LSLTRALLYM VMQCLGAICG AGVVKGFQQT LYMGAGGGAN SVNPGYTKGD GLGAEIVGTF VLVYTVFSAT
201: DAKRSARDSH VPILAPLPIG FAVFLVHLAT IPITGTGINP ARSLGAAIVY NRSNAWNDHW IFWVGPFIGA ALAAIYHVVI IRAIPFKSRD
101: MIFALVYCTA GISGGHINPA VTFGLLLARK LSLTRALLYM VMQCLGAICG AGVVKGFQQT LYMGAGGGAN SVNPGYTKGD GLGAEIVGTF VLVYTVFSAT
201: DAKRSARDSH VPILAPLPIG FAVFLVHLAT IPITGTGINP ARSLGAAIVY NRSNAWNDHW IFWVGPFIGA ALAAIYHVVI IRAIPFKSRD
001: MEGKEEDVRV GANKFPERQP IGTSAQSTDK DYKEPPPAPL FEPGELSSWS FYRAGIAEFI ATFLFLYITV LTVMGVKRAP NMCASVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRAVFYMIMQ CLGAICGAGV VKGFQPTPYQ TLGGGANTVA HGYTKGSGLG AEIIGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HSWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKS
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRAVFYMIMQ CLGAICGAGV VKGFQPTPYQ TLGGGANTVA HGYTKGSGLG AEIIGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HSWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKS
Arabidopsis Description
PIP1.4TMP-C [Source:UniProtKB/TrEMBL;Acc:A0A178USZ7]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.