Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- vacuole 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027652_P001 | Maize | plasma membrane | 94.4 | 94.4 |
| Os03t0146100-01 | Rice | nucleus | 94.0 | 94.0 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 91.6 | 91.6 |
| TraesCS4B01G310900.1 | Wheat | unclear | 91.6 | 91.6 |
| TraesCS4A01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 91.2 | 91.2 |
| TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 88.8 | 86.38 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, vacuole | 84.8 | 84.8 |
| GSMUA_Achr8P12920_001 | Banana | cytosol, plasma membrane, vacuole | 84.4 | 84.4 |
| GSMUA_Achr1P01270_001 | Banana | cytosol, plasma membrane, vacuole | 84.0 | 84.0 |
| GSMUA_Achr5P19470_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 82.0 | 81.67 |
| CDY66645 | Canola | plastid | 70.8 | 80.09 |
| CDY67380 | Canola | plastid | 70.8 | 80.09 |
| Solyc06g074820.2.1 | Tomato | plastid | 80.0 | 80.0 |
| PGSC0003DMT400018375 | Potato | cytosol | 79.6 | 79.6 |
| CDY53270 | Canola | plasma membrane | 79.2 | 78.88 |
| Bra017222.1-P | Field mustard | cytosol | 79.2 | 78.88 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 78.8 | 78.49 |
| CDY13639 | Canola | plasma membrane | 79.2 | 78.26 |
| CDX83623 | Canola | golgi, plasma membrane, plastid | 79.2 | 78.26 |
| VIT_08s0007g04780.t01 | Wine grape | cytosol | 78.4 | 78.09 |
| Bra025210.1-P | Field mustard | plasma membrane | 78.8 | 77.87 |
| CDY48983 | Canola | plasma membrane | 78.0 | 77.08 |
| Bra032937.1-P | Field mustard | plasma membrane | 78.0 | 77.08 |
| CDY28539 | Canola | plasma membrane | 78.0 | 77.08 |
| AT3G26520.1 | Thale cress | plasma membrane | 77.2 | 76.28 |
| KRH67767 | Soybean | mitochondrion | 74.4 | 74.4 |
| KRG96046 | Soybean | nucleus | 74.0 | 74.0 |
| EES04303 | Sorghum | cytosol | 73.2 | 70.93 |
| VIT_06s0061g00730.t01 | Wine grape | cytosol, plasma membrane, vacuole | 70.8 | 70.52 |
| KXG31086 | Sorghum | golgi, plasma membrane, vacuole | 61.2 | 61.45 |
| EES12617 | Sorghum | plasma membrane | 60.8 | 61.04 |
| EER89797 | Sorghum | plasma membrane | 60.4 | 60.89 |
| EER94020 | Sorghum | golgi, mitochondrion, plasma membrane | 56.4 | 53.01 |
| EES02191 | Sorghum | cytosol | 53.2 | 52.78 |
| EES11105 | Sorghum | mitochondrion, plasma membrane | 52.4 | 48.88 |
| KXG31483 | Sorghum | extracellular, golgi, plasma membrane | 45.6 | 45.06 |
| EER95659 | Sorghum | mitochondrion | 46.4 | 42.8 |
| OQU82093 | Sorghum | plasma membrane | 39.2 | 36.7 |
| EES17913 | Sorghum | cytosol, plastid | 46.0 | 36.62 |
| OQU91911 | Sorghum | plasma membrane | 35.2 | 31.21 |
| EER98451 | Sorghum | plasma membrane | 35.6 | 30.69 |
| EER98454 | Sorghum | plasma membrane | 34.8 | 30.42 |
| EER98453 | Sorghum | plasma membrane | 34.8 | 30.42 |
| EER98452 | Sorghum | plasma membrane | 34.8 | 30.42 |
| EES05459 | Sorghum | plasma membrane | 34.8 | 30.1 |
| EER98457 | Sorghum | plasma membrane | 34.4 | 30.07 |
| EES11124 | Sorghum | plasma membrane | 34.0 | 29.11 |
| OQU85985 | Sorghum | cytosol, peroxisome, plasma membrane | 32.4 | 27.93 |
| EES11257 | Sorghum | cytosol, peroxisome, plasma membrane | 32.0 | 27.78 |
| EES07484 | Sorghum | plasma membrane | 31.6 | 27.34 |
| EER89434 | Sorghum | peroxisome | 30.8 | 26.01 |
| OQU88961 | Sorghum | plastid | 33.2 | 22.19 |
| KXG36091 | Sorghum | cytosol, peroxisome, plasma membrane | 28.8 | 22.09 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EntrezGene:8080564 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | UniProt:C5WXY9 |
| EnsemblPlants:EER92857 | ProteinID:EER92857 | ProteinID:EER92857.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0015250 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 | InterPro:IPR023271 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF265 | EnsemblPlantsGene:SORBI_3001G505100 | SUPFAM:SSF81338 | unigene:Sbi.14078 | TMHMM:TMhelix | UniParc:UPI0001A82BB0 |
| RefSeq:XP_002465859.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:77324938..77327995
Molecular Weight (calculated)
25770.4 Da
IEP (calculated)
6.794
GRAVY (calculated)
0.824
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MPISRIAVGT HHEVYHPGAL KAALAEFIST LIFVFAGQGS GMAFSKLTSG GATTPSGLIA AAVAHAFALF VAVSVGANIS GGHVNPAVTF GAFVGGNITL
101: FRGLLYWVAQ LLGSTVACFL LRFSTGGLAT GTFGLTGVSV WEAVVMEIVM TFGLVYTVYA TAVDPKKGSL GTIAPIAIGF IVGANILVGG AFTGASMNPA
201: VSFGPALVSW EWGYQWVYWV GPLIGGGLAG VIYELLFISQ THEQLPTTDY
101: FRGLLYWVAQ LLGSTVACFL LRFSTGGLAT GTFGLTGVSV WEAVVMEIVM TFGLVYTVYA TAVDPKKGSL GTIAPIAIGF IVGANILVGG AFTGASMNPA
201: VSFGPALVSW EWGYQWVYWV GPLIGGGLAG VIYELLFISQ THEQLPTTDY
001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
Arabidopsis Description
TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.