Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 4
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G17340.1 | EES02290 | AT3G16310.1 | 21798944 |
| AT4G17340.1 | EES19830 | AT3G16310.1 | 21798944 |
| AT4G17340.1 | EES12559 | AT3G60600.1 | 21798944 |
| AT4G17340.1 | EES14570 | AT3G60600.1 | 21798944 |
| AT4G17340.1 | KXG31128 | AT3G60600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0658100-01 | Rice | vacuole | 78.31 | 94.66 |
| Zm00001d051362_P001 | Maize | plasma membrane | 93.98 | 93.98 |
| Zm00001d017485_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 93.57 | 93.2 |
| TraesCS6D01G232100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 89.96 | 89.96 |
| TraesCS6A01G250300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 89.96 | 89.96 |
| HORVU6Hr1G062980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 89.96 | 89.96 |
| HORVU0Hr1G032130.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 89.96 | 89.96 |
| TraesCS6B01G275100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 89.56 | 89.56 |
| EES12617 | Sorghum | plasma membrane | 89.16 | 89.16 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 85.54 | 85.54 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 83.53 | 83.53 |
| Solyc06g060760.2.1 | Tomato | endoplasmic reticulum | 81.53 | 81.2 |
| PGSC0003DMT400030994 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 81.12 | 80.8 |
| VIT_00s0229g00130.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 79.52 | 79.2 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 78.71 | 78.4 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 77.51 | 77.2 |
| Bra026245.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 77.51 | 77.2 |
| CDY51678 | Canola | plasma membrane, vacuole | 77.51 | 77.2 |
| CDY65121 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 77.51 | 77.2 |
| CDY64499 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 77.11 | 76.8 |
| VIT_00s2783g00010.t01 | Wine grape | extracellular | 38.15 | 76.61 |
| Bra022131.1-P | Field mustard | extracellular | 62.65 | 76.47 |
| CDY28932 | Canola | endoplasmic reticulum, extracellular, vacuole | 63.86 | 75.71 |
| CDX77768 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 76.31 | 75.7 |
| CDY59296 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 76.31 | 75.7 |
| Bra024943.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 75.5 | 74.9 |
| KRH77347 | Soybean | mitochondrion | 73.9 | 73.9 |
| KRH28112 | Soybean | mitochondrion | 73.49 | 73.49 |
| EER89797 | Sorghum | plasma membrane | 68.67 | 68.95 |
| EER92857 | Sorghum | cytosol | 61.45 | 61.2 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 28.11 | 56.45 |
| EES04303 | Sorghum | cytosol | 56.22 | 54.26 |
| EES02191 | Sorghum | cytosol | 49.4 | 48.81 |
| EER94020 | Sorghum | golgi, mitochondrion, plasma membrane | 49.0 | 45.86 |
| EES11105 | Sorghum | mitochondrion, plasma membrane | 47.79 | 44.4 |
| KXG31483 | Sorghum | extracellular, golgi, plasma membrane | 43.78 | 43.08 |
| OQU82093 | Sorghum | plasma membrane | 43.37 | 40.45 |
| EES17913 | Sorghum | cytosol, plastid | 46.59 | 36.94 |
| EER95659 | Sorghum | mitochondrion | 38.15 | 35.06 |
| EER98457 | Sorghum | plasma membrane | 37.75 | 32.87 |
| EER98454 | Sorghum | plasma membrane | 37.35 | 32.52 |
| EER98453 | Sorghum | plasma membrane | 37.35 | 32.52 |
| EER98452 | Sorghum | plasma membrane | 37.35 | 32.52 |
| EER98451 | Sorghum | plasma membrane | 36.95 | 31.72 |
| EES05459 | Sorghum | plasma membrane | 36.55 | 31.49 |
| OQU91911 | Sorghum | plasma membrane | 34.94 | 30.85 |
| EES11124 | Sorghum | plasma membrane | 36.14 | 30.82 |
| EES11257 | Sorghum | cytosol, peroxisome, plasma membrane | 32.13 | 27.78 |
| EES07484 | Sorghum | plasma membrane | 32.13 | 27.68 |
| OQU85985 | Sorghum | cytosol, peroxisome, plasma membrane | 32.13 | 27.59 |
| EER89434 | Sorghum | peroxisome | 32.13 | 27.03 |
| OQU88961 | Sorghum | plastid | 35.74 | 23.8 |
| KXG36091 | Sorghum | cytosol, peroxisome, plasma membrane | 26.51 | 20.25 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | UniProt:A0A194YSD4 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 | EnsemblPlants:KXG31086 | ProteinID:KXG31086 | ProteinID:KXG31086.1 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF257 | EnsemblPlantsGene:SORBI_3004G295100 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI0001B38059 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:63501044..63502618
Molecular Weight (calculated)
25098.5 Da
IEP (calculated)
5.957
GRAVY (calculated)
0.904
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKLAFGSVG DSFSATSIKA YVSEFIATLL FVFAGVGSAI AFGQLTNDGA LDPAGLVAIA IAHALALFVG VSIAANISGG HLNPAVTFGL AVGGHITILT
101: GIFYWVAQLL GASVACLLLK FVTHGKAIPT HGVSGISELE GVVFEIIITF ALVYTVYATA ADPKKGSLGT IAPIAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVAAGNF AGNWVYWVGP LIGGGLAGLI YGDVFIGGNY QQVADQDYA
101: GIFYWVAQLL GASVACLLLK FVTHGKAIPT HGVSGISELE GVVFEIIITF ALVYTVYATA ADPKKGSLGT IAPIAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVAAGNF AGNWVYWVGP LIGGGLAGLI YGDVFIGGNY QQVADQDYA
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.