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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 3
  • golgi 3
  • plasma membrane 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 99.2 99.2
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 98.8 98.8
Bra022131.1-P Field mustard extracellular 75.7 93.14
AT5G47450.1 Thale cress golgi, plasma membrane 90.84 91.2
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 89.24 89.6
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 81.27 81.6
Solyc06g060760.2.1 Tomato endoplasmic reticulum 81.27 81.6
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 77.69 78.31
VIT_00s0229g00130.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 77.69 78.0
GSMUA_Achr11P... Banana extracellular, plasma membrane 76.89 77.51
KRH28112 Soybean mitochondrion 76.49 77.11
KRH77347 Soybean mitochondrion 76.1 76.71
KXG31086 Sorghum golgi, plasma membrane, vacuole 74.9 75.5
Zm00001d002738_P001 Maize plasma membrane 74.5 75.4
Zm00001d017485_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 74.9 75.2
Zm00001d051362_P001 Maize plasma membrane 74.5 75.1
Os02t0658100-01 Rice vacuole 61.35 74.76
TraesCS6B01G275100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 74.1 74.7
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 74.1 74.7
TraesCS6A01G250300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 74.1 74.7
EES12617 Sorghum plasma membrane 73.71 74.3
Zm00001d026177_P001 Maize extracellular 73.31 74.19
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 73.31 73.9
HORVU0Hr1G032130.2 Barley endoplasmic reticulum, plasma membrane, vacuole 73.31 73.9
HORVU6Hr1G062980.1 Barley endoplasmic reticulum, plasma membrane, vacuole 73.31 73.9
TraesCS2A01G414100.1 Wheat plasma membrane 72.91 73.79
TraesCS2B01G433200.1 Wheat plasma membrane 72.91 73.79
TraesCS2D01G411400.1 Wheat plasma membrane 72.11 72.98
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 71.71 72.58
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 60.16 71.9
Os04t0550900-00 Rice endoplasmic reticulum, extracellular, vacuole 38.25 67.61
Bra017222.1-P Field mustard cytosol 63.35 63.35
Bra025210.1-P Field mustard plasma membrane 62.55 62.06
Bra032937.1-P Field mustard plasma membrane 62.55 62.06
Bra037415.1-P Field mustard cytosol 52.59 52.38
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 49.4 49.8
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 50.6 47.74
Bra016014.1-P Field mustard cytosol 49.8 47.17
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 48.61 45.69
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 48.61 45.69
Bra018148.1-P Field mustard extracellular, plasma membrane, plastid 39.84 39.22
Bra011585.1-P Field mustard plasma membrane 36.26 32.38
Bra020238.1-P Field mustard plasma membrane 36.26 32.16
Bra034675.1-P Field mustard cytosol, peroxisome, plasma membrane 35.86 32.03
Bra017697.1-P Field mustard cytosol 35.86 32.03
Bra006650.1-P Field mustard plasma membrane 36.26 31.93
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 29.08 31.6
Bra000111.1-P Field mustard plasma membrane 36.26 31.6
Bra002462.1-P Field mustard cytosol 32.27 31.15
Bra003196.1-P Field mustard plasma membrane 35.46 31.12
Bra006997.1-P Field mustard plasma membrane 35.46 31.01
Bra023103.1-P Field mustard plasma membrane 35.06 30.88
Bra007100.1-P Field mustard plasma membrane 35.06 30.77
Bra023102.1-P Field mustard plasma membrane 34.26 30.39
Bra033248.1-P Field mustard cytosol, peroxisome, plasma membrane 33.86 29.72
Bra032644.1-P Field mustard plasma membrane 33.86 29.72
Bra014437.1-P Field mustard plasma membrane 32.67 28.67
Bra007603.1-P Field mustard plasma membrane 32.67 28.67
Bra004950.1-P Field mustard cytosol, peroxisome, plasma membrane 32.67 28.67
Bra019307.1-P Field mustard cytosol, peroxisome, plasma membrane 32.67 28.57
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 27.09 28.57
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 32.67 28.47
Bra039301.1-P Field mustard cytosol, peroxisome, plasma membrane 28.69 25.71
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlantsGene:Bra024943EnsemblPlants:Bra024943.1
EnsemblPlants:Bra024943.1-PGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271UniProt:M4E837
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI000253FA90SEG:seg
Description
AT5G47450 (E=9e-120) ATTIP2;3, TIP2;3, DELTA-TIP3 | AtTIP2;3; ammonia transporter/ methylammonium transmembrane transporter/ water channel
Coordinates
chrA06:+:24330029..24331363
Molecular Weight (calculated)
25247.0 Da
IEP (calculated)
4.759
GRAVY (calculated)
1.033
Length
251 amino acids
Sequence
(BLAST)
001: MVKIAVASLG DSFSVASLKA YLPEFIATLI FVFAGVGSAI AFGKITSDAA LDPAGLVAIA VAHAFALFVG VSVAANISGG HLNPAVTLGL AVGGNITLIT
101: GFLYWVAQCL GSTVACLLLV FVTNGESVPT HGVGAGLGAV EAIVMEIIVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAIVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSP YEAVETREIR V
Best Arabidopsis Sequence Match ( AT5G47450.1 )
(BLAST)
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.