Factsheet for Bra034675.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000111.1-P
Bra003423.1-P
Bra007547.1-P
Bra007603.1-P
Bra014437.1-P
Bra014481.1-P
Bra019307.1-P
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35100.1	Bra030034.1-P	AT1G27300.1	21798944
AT4G35100.1	Bra032817.1-P	AT1G27300.1	21798944
AT4G35100.1	Bra000111.1-P	AT2G39010.1	21798944
AT4G35100.1	Bra003423.1-P	AT3G60600.1	21798944
AT4G35100.1	Bra007547.1-P	AT3G60600.1	21798944
AT4G35100.1	Bra014481.1-P	AT3G60600.1	21798944
AT4G35100.1	Bra007603.1-P	AT3G61430.1	21798944
AT4G35100.1	Bra014437.1-P	AT3G61430.1	21798944
AT4G35100.1	Bra019307.1-P	AT4G23400.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76314	Canola	cytosol	98.93	98.93
CDY17511	Canola	plasma membrane	98.93	98.93
Bra011585.1-P	Field mustard	plasma membrane	97.51	97.51
AT4G35100.1	Thale cress	plasma membrane	95.02	95.36
Bra017697.1-P	Field mustard	cytosol	94.66	94.66
KRH60692	Soybean	mitochondrion	87.19	89.09
VIT_03s0038g02520.t01	Wine grape	plasma membrane	87.19	87.81
Solyc01g111660.2.1	Tomato	nucleus	87.9	87.28
PGSC0003DMT400015824	Potato	plasma membrane	87.54	86.93
GSMUA_Achr5P11480_001	Banana	plasma membrane	61.21	86.87
KRH51390	Soybean	plasma membrane	85.41	86.33
GSMUA_Achr2P11190_001	Banana	plasma membrane	83.27	83.27
GSMUA_Achr1P02360_001	Banana	unclear	82.56	82.27
Os04t0233400-01	Rice	plasma membrane	80.78	80.5
KRH16406	Soybean	extracellular	43.42	79.74
TraesCS2A01G065700.1	Wheat	golgi	80.07	79.23
TraesCS2D01G063900.1	Wheat	plasma membrane	80.07	79.23
TraesCS2B01G077700.1	Wheat	plasma membrane	80.07	79.23
Bra002462.1-P	Field mustard	cytosol	71.17	76.92
Bra006650.1-P	Field mustard	plasma membrane	77.58	76.49
Bra020238.1-P	Field mustard	plasma membrane	76.51	75.97
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	62.28	75.76
Bra023102.1-P	Field mustard	plasma membrane	75.09	74.56
Bra006997.1-P	Field mustard	plasma membrane	75.8	74.22
Bra023103.1-P	Field mustard	plasma membrane	74.73	73.68
GSMUA_Achr1P07460_001	Banana	extracellular	45.55	73.14
Bra007100.1-P	Field mustard	plasma membrane	74.38	73.08
Bra003196.1-P	Field mustard	plasma membrane	74.02	72.73
Bra000111.1-P	Field mustard	plasma membrane	74.38	72.57
GSMUA_Achr1P26380_001	Banana	plasma membrane	71.17	71.17
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.79	70.59
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.17	69.44
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	70.11	68.88
Bra032644.1-P	Field mustard	plasma membrane	69.75	68.53
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.39	67.94
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.62	66.43
Bra007603.1-P	Field mustard	plasma membrane	67.26	66.08
Bra014437.1-P	Field mustard	plasma membrane	67.26	66.08
HORVU2Hr1G010990.2	Barley	plasma membrane	70.11	61.95
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.07	59.29
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	33.81	38.15
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	33.45	37.9
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	28.11	37.62
Bra022131.1-P	Field mustard	extracellular	27.05	37.25
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	32.74	36.8
Bra032937.1-P	Field mustard	plasma membrane	32.38	35.97
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	32.03	35.86
Bra037415.1-P	Field mustard	cytosol	31.32	34.92
Bra025210.1-P	Field mustard	plasma membrane	31.32	34.78
Bra017222.1-P	Field mustard	cytosol	30.61	34.26
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	30.25	34.14
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	30.61	32.33
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	29.89	31.46
Bra016014.1-P	Field mustard	cytosol	29.54	31.32
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	29.18	30.71
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	24.91	27.45

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra034675	EnsemblPlants:Bra034675.1
EnsemblPlants:Bra034675.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4F0T0
InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF196	SUPFAM:SSF81338
TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00025461B6	:	:	:

Description

AT4G35100 (E=4e-153) PIP3, PIP3A, PIP2;7, SIMIP | PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3); water channel

Coordinates

chrA08:-:12130564..12131939

Molecular Weight (calculated)

29713.2 Da

IEP (calculated)

9.271

GRAVY (calculated)

0.452

Length

281 amino acids

Sequence
(BLAST)

001: MSKEVSEEGH TQSHGKDYVD PPPAPFLDMG ELKSWSFYRA LIAEFIATLL FLYVTVATVI GHKKQTGPCD GVGLLGIAWA FGGMIFVLVY CTAGISGGHI
101: NPAGTFGLFL ARKVSLVRAV GYMIAQCLGA ICGVGFVKAF MKTPYNTLGG GANTVAPGYS KGTALGAEII GTFVLVYTVF SATDPKRSAR DSHIPVLAPL
201: PIGFAVFMVH LATIPITGTG INPARSFGAA VIYNNEKARD DHWIFWVGPF VGALAAAAYH QYILRAAAVK ALASFRSSAT N

Best Arabidopsis Sequence Match ( AT4G35100.2 )
(BLAST)

001: MSKEVSEEGK THHGKDYVDP PPAPLLDMGE LKSWSFYRAL IAEFIATLLF LYVTVATVIG HKKQTGPCDG VGLLGIAWAF GGMIFVLVYC TAGISGGHIN
101: PAVTFGLFLA RKVSLVRALG YMIAQCLGAI CGVGFVKAFM KTPYNTLGGG ANTVADGYSK GTALGAEIIG TFVLVYTVFS ATDPKRSARD SHIPVLAPLP
201: IGFAVFMVHL ATIPITGTGI NPARSFGAAV IYNNEKAWDD QWIFWVGPFL GALAAAAYHQ YILRASAIKA LGSFRSNATN

Arabidopsis Description

PIP2-7Aquaporin PIP2-7 [Source:UniProtKB/Swiss-Prot;Acc:P93004]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.