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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001626.1-P
Bra002268.1-P
Bra002403.1-P
Bra003196.1-P
Bra003751.1-P
Bra004499.1-P
Bra005796.1-P
Bra006523.1-P
Bra006619.1-P
Bra006653.1-P
Bra007100.1-P
Bra007316.1-P
Bra008079.1-P
Bra008201.1-P
Bra008545.1-P
Bra008891.1-P
Bra009481.1-P
Bra009694.1-P
Bra010354.1-P
Bra010688.1-P
Bra011055.1-P
Bra011812.1-P
Bra012879.1-P
Bra013118.1-P
Bra013225.1-P
Bra013226.1-P
Bra013962.1-P
Bra014634.1-P
Bra014848.1-P
Bra015157.1-P
Bra015386.1-P
Bra015839.1-P
Bra016014.1-P
Bra016774.1-P
Bra018237.1-P
Bra018466.1-P
Bra018531.1-P
Bra019447.1-P
Bra019762.1-P
Bra019965.1-P
Bra020182.1-P
Bra021420.1-P
Bra022660.1-P
Bra022748.1-P
Bra023375.1-P
Bra024788.1-P
Bra026074.1-P
Bra026245.1-P
Bra026491.1-P
Bra026567.1-P
Bra026579.1-P
Bra026727.1-P
Bra026782.1-P
Bra027498.1-P
Bra027518.1-P
Bra028920.1-P
Bra030034.1-P
Bra030565.1-P
Bra032628.1-P
Bra032817.1-P
Bra033173.1-P
Bra033276.1-P
Bra033558.1-P
Bra033708.1-P
Bra035001.1-P
Bra035477.1-P
Bra036243.1-P
Bra036539.1-P
Bra036849.1-P
Bra037287.1-P
Bra038380.1-P
Bra039822.1-P
Bra039859.1-P
Bra040000.1-P
Bra040001.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G27300.1 Bra032628.1-P AT1G01230.1 21798944
AT1G27300.1 Bra033276.1-P AT1G01230.1 21798944
AT1G27300.1 Bra030565.1-P AT1G04340.1 21798944
AT1G27300.1 Bra015386.1-P AT1G05070.1 21798944
AT1G27300.1 Bra018466.1-P AT1G10030.1 21798944
AT1G27300.1 Bra019965.1-P AT1G10030.1 21798944
AT1G27300.1 Bra016774.1-P AT1G12390.1 21798944
AT1G27300.1 Bra019762.1-P AT1G12390.1 21798944
AT1G27300.1 Bra026782.1-P AT1G15080.1 21798944
AT1G27300.1 Bra026074.1-P AT1G16240.1 21798944
AT1G27300.1 Bra026727.1-P AT1G16240.1 21798944
AT1G27300.1 Bra030034.1-P AT1G27300.1 21798944
AT1G27300.1 Bra032817.1-P AT1G27300.1 21798944
AT1G27300.1 Bra035477.1-P AT1G33110.1 21798944
AT1G27300.1 Bra040000.1-P AT1G33110.1 21798944
AT1G27300.1 Bra040001.1-P AT1G33110.1 21798944
AT1G27300.1 Bra008079.1-P AT1G73190.1 21798944
AT1G27300.1 Bra016014.1-P AT1G73190.1 21798944
AT1G27300.1 Bra003751.1-P AT1G75500.1 21798944
AT1G27300.1 Bra008201.1-P AT1G75500.1 21798944
AT1G27300.1 Bra015839.1-P AT1G75500.1 21798944
AT1G27300.1 Bra026579.1-P AT2G02810.1 21798944
AT1G27300.1 Bra024788.1-P AT2G03120.1 21798944
AT1G27300.1 Bra026567.1-P AT2G03120.1 21798944
AT1G27300.1 Bra015157.1-P AT2G04900.1 21798944
AT1G27300.1 Bra013118.1-P AT2G14835.2 21798944
AT1G27300.1 Bra039822.1-P AT2G14835.2 21798944
AT1G27300.1 Bra010688.1-P AT2G16510.1 21798944
AT1G27300.1 Bra037287.1-P AT2G16800.1 21798944
AT1G27300.1 Bra018237.1-P AT2G31490.1 21798944
AT1G27300.1 Bra004499.1-P AT2G46890.1 21798944
AT1G27300.1 Bra036539.1-P AT2G47840.1 21798944
AT1G27300.1 Bra021420.1-P AT3G02690.1 21798944
AT1G27300.1 Bra028920.1-P AT3G02690.1 21798944
AT1G27300.1 Bra001626.1-P AT3G16240.1 21798944
AT1G27300.1 Bra013226.1-P AT3G25190.1 21798944
AT1G27300.1 Bra013225.1-P AT3G25220.1 21798944
AT1G27300.1 Bra019447.1-P AT3G43520.1 21798944
AT1G27300.1 Bra035001.1-P AT3G44220.1 21798944
AT1G27300.1 Bra006653.1-P AT3G50920.1 21798944
AT1G27300.1 Bra012879.1-P AT3G50920.1 21798944
AT1G27300.1 Bra036849.1-P AT3G50920.1 21798944
AT1G27300.1 Bra014848.1-P AT3G54020.1 21798944
AT1G27300.1 Bra003196.1-P AT3G54820.1 21798944
AT1G27300.1 Bra007100.1-P AT3G54820.1 21798944
AT1G27300.1 Bra007316.1-P AT3G57280.1 21798944
AT1G27300.1 Bra014634.1-P AT3G57280.1 21798944
AT1G27300.1 Bra008545.1-P AT4G01430.1 21798944
AT1G27300.1 Bra018531.1-P AT4G02725.1 21798944
AT1G27300.1 Bra036243.1-P AT4G02725.1 21798944
AT1G27300.1 Bra038380.1-P AT4G09580.1 21798944
AT1G27300.1 Bra033173.1-P AT4G10430.1 21798944
AT1G27300.1 Bra039859.1-P AT4G14455.1 21798944
AT1G27300.1 Bra026245.1-P AT4G17340.1 21798944
AT1G27300.1 Bra010354.1-P AT4G28720.1 21798944
AT1G27300.1 Bra011055.1-P AT4G28720.1 21798944
AT1G27300.1 Bra010688.1-P AT4G34720.1 21798944
AT1G27300.1 Bra033558.1-P AT4G38250.1 21798944
AT1G27300.1 Bra011812.1-P AT4G40042.1 21798944
AT1G27300.1 Bra005796.1-P AT5G04160.1 21798944
AT1G27300.1 Bra009481.1-P AT5G04160.1 21798944
AT1G27300.1 Bra008891.1-P AT5G12390.1 21798944
AT1G27300.1 Bra023375.1-P AT5G12390.1 21798944
AT1G27300.1 Bra013962.1-P AT5G17630.1 21798944
AT1G27300.1 Bra002268.1-P AT5G19875.1 21798944
AT1G27300.1 Bra006523.1-P AT5G19875.1 21798944
AT1G27300.1 Bra002403.1-P AT5G22290.1 21798944
AT1G27300.1 Bra006619.1-P AT5G22290.1 21798944
AT1G27300.1 Bra020182.1-P AT5G22290.1 21798944
AT1G27300.1 Bra009694.1-P AT5G23550.1 21798944
AT1G27300.1 Bra026491.1-P AT5G23550.1 21798944
AT1G27300.1 Bra027498.1-P AT5G43460.1 21798944
AT1G27300.1 Bra027518.1-P AT5G43970.1 21798944
AT1G27300.1 Bra033708.1-P AT5G43970.1 21798944
AT1G27300.1 Bra022748.1-P AT5G51010.1 21798944
AT1G27300.1 Bra022660.1-P AT5G53560.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY15722 Canola cytosol 94.44 94.44
Bra032817.1-P Field mustard nucleus 75.25 74.13
AT1G27300.1 Thale cress nucleus 67.17 66.5
VIT_01s0010g03800.t01 Wine grape cytosol 34.85 35.2
KRH31520 Soybean cytosol 23.74 30.92
KRG97393 Soybean nucleus 26.77 28.19
PGSC0003DMT400084737 Potato cytosol 28.28 27.05
KRH76090 Soybean nucleus 15.15 26.09
Solyc05g015640.2.1 Tomato cytosol 26.26 25.74
TraesCS2A01G346700.1 Wheat cytosol 24.75 25.26
TraesCS2B01G365000.1 Wheat cytosol 24.24 25.0
Zm00001d050563_P001 Maize nucleus 25.25 24.75
TraesCS2D01G345400.1 Wheat cytosol 24.24 24.49
HORVU2Hr1G084420.1 Barley cytosol 23.23 23.96
Os02t0509600-01 Rice plasma membrane 24.75 23.22
EES05123 Sorghum nucleus 23.74 21.86
Zm00001d016570_P001 Maize cytosol 23.23 21.4
Protein Annotations
EnsemblPlants:Bra030034.1EnsemblPlants:Bra030034.1-PEnsemblPlantsGene:Bra030034ncoils:CoilPANTHER:PTHR35280SEG:seg
UniParc:UPI00025411BBUniProt:M4EML4MapMan:35.2:::
Description
AT1G27300 (E=3e-054) | unknown protein
Coordinates
chrA07:-:7025627..7026724
Molecular Weight (calculated)
22498.7 Da
IEP (calculated)
4.635
GRAVY (calculated)
-0.721
Length
198 amino acids
Sequence
(BLAST)
001: MESSEDVEVL SRAIEKLLDE KKNREIAGES FIEDDDDQLF LSRIISQLES PNQFPKTVET TKGEEEPLPD SLPSKGKDKG ERQLEESIEE IAKDIKEVKR
101: QNKVTHILLS ALIILTLTWQ LSEYSMIYMM KERLSHPIRS IGGMFSGLFK GKLRPIKNKL SNAREEDNHH NGNGTNTGGV HIQVPELLRD LGLDDDDE
Best Arabidopsis Sequence Match ( AT1G27300.1 )
(BLAST)
001: MESSEDVENL SRAIEKLLHE KRKREASGDA FIEDADDQLF LSSLISQLES PNPKGKEDVI TGEEEEKEEE SADSSPSKGK SEGQRQLEES IEEIAKDIKK
101: VKKQNKITHV LLSATIILTL VWQLSEYSMI FMLKDRISHP VRSIGGMLNG MFKGKLRPIK NQLAGTSNSN DQNNHGNGSH TGPQLQVPEL LREFGFDDEE
Arabidopsis Description
F17L21.9 [Source:UniProtKB/TrEMBL;Acc:Q9FZK5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.