Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030034.1-P | Field mustard | cytosol | 94.44 | 94.44 |
| CDY03907 | Canola | cytosol | 88.38 | 90.21 |
| CDY27605 | Canola | cytosol | 80.3 | 79.1 |
| CDX84933 | Canola | cytosol | 77.27 | 77.67 |
| AT1G27300.1 | Thale cress | nucleus | 67.68 | 67.0 |
| VIT_01s0010g03800.t01 | Wine grape | cytosol | 34.34 | 34.69 |
| KRH31520 | Soybean | cytosol | 23.74 | 30.92 |
| KRG97393 | Soybean | nucleus | 26.77 | 28.19 |
| PGSC0003DMT400084737 | Potato | cytosol | 27.78 | 26.57 |
| KRH76090 | Soybean | nucleus | 15.15 | 26.09 |
| TraesCS2A01G346700.1 | Wheat | cytosol | 25.25 | 25.77 |
| Solyc05g015640.2.1 | Tomato | cytosol | 26.26 | 25.74 |
| TraesCS2B01G365000.1 | Wheat | cytosol | 24.24 | 25.0 |
| TraesCS2D01G345400.1 | Wheat | cytosol | 24.75 | 25.0 |
| HORVU2Hr1G084420.1 | Barley | cytosol | 23.74 | 24.48 |
| Zm00001d050563_P001 | Maize | nucleus | 24.75 | 24.26 |
| Zm00001d016570_P001 | Maize | cytosol | 24.24 | 22.33 |
| Os02t0509600-01 | Rice | plasma membrane | 23.74 | 22.27 |
| EES05123 | Sorghum | nucleus | 23.23 | 21.4 |
Protein Annotations
| EnsemblPlants:CDY15722 | EnsemblPlantsGene:GSBRNA2T00089948001 | ncoils:Coil | PANTHER:PTHR35280 | ProteinID:CDY15722 | ProteinID:CDY15722.1 |
| SEG:seg | UniParc:UPI0004EDB07B | UniProt:A0A078FS99 | MapMan:35.2 | : | : |
Description
BnaA07g08930DBnaA07g08930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS99]
Coordinates
chrLK032056:-:733480..734631
Molecular Weight (calculated)
22501.7 Da
IEP (calculated)
4.769
GRAVY (calculated)
-0.717
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSEDVEIL SRAIEKLLDE KKNREIAGES FIEDDDDQLF LSRIISQLES PNQFPKTVET TKGEEESLPD SLPSKGKDKG KRQLEESIEE IAKDIKEVKR
101: QNKVTHILLS ALIILTLTWQ LSEYSMIYMM KERLSHPIRS IGGMFSGLFK GKLRPIKNKL SNAREEDNHH NGNGTNTGGV HIQVPELLRD LGLDDDDE
101: QNKVTHILLS ALIILTLTWQ LSEYSMIYMM KERLSHPIRS IGGMFSGLFK GKLRPIKNKL SNAREEDNHH NGNGTNTGGV HIQVPELLRD LGLDDDDE
001: MESSEDVENL SRAIEKLLHE KRKREASGDA FIEDADDQLF LSSLISQLES PNPKGKEDVI TGEEEEKEEE SADSSPSKGK SEGQRQLEES IEEIAKDIKK
101: VKKQNKITHV LLSATIILTL VWQLSEYSMI FMLKDRISHP VRSIGGMLNG MFKGKLRPIK NQLAGTSNSN DQNNHGNGSH TGPQLQVPEL LREFGFDDEE
101: VKKQNKITHV LLSATIILTL VWQLSEYSMI FMLKDRISHP VRSIGGMLNG MFKGKLRPIK NQLAGTSNSN DQNNHGNGSH TGPQLQVPEL LREFGFDDEE
Arabidopsis Description
F17L21.9 [Source:UniProtKB/TrEMBL;Acc:Q9FZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.