Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71741 | Canola | endoplasmic reticulum, plasma membrane | 82.08 | 79.79 |
| CDY41396 | Canola | endoplasmic reticulum, plasma membrane | 87.81 | 78.78 |
| CDX70255 | Canola | endoplasmic reticulum, plasma membrane | 87.46 | 78.46 |
| AT5G04160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 86.74 | 78.32 |
| CDY00918 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.26 | 75.63 |
| CDX88102 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY06070 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY16783 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY19068 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY30718 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY32060 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY38198 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY40726 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY41333 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDX76352 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY43207 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY56711 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY63119 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| CDY64269 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 83.87 | 72.22 |
| VIT_08s0007g08970.t01 | Wine grape | plastid | 77.06 | 67.82 |
| CDY36312 | Canola | endoplasmic reticulum, extracellular | 28.32 | 66.95 |
| PGSC0003DMT400021093 | Potato | endoplasmic reticulum, plasma membrane | 74.19 | 66.77 |
| Solyc10g079280.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 73.84 | 66.45 |
| Solyc10g079910.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 72.04 | 64.84 |
| Solyc04g016280.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 71.68 | 64.52 |
| PGSC0003DMT400076739 | Potato | plasma membrane | 71.68 | 64.52 |
| CDY36328 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 33.69 | 63.51 |
| PGSC0003DMT400033107 | Potato | endoplasmic reticulum, plasma membrane | 58.78 | 62.36 |
| CDY53550 | Canola | mitochondrion, plastid | 83.87 | 58.79 |
| CDY01011 | Canola | plasma membrane | 64.87 | 58.77 |
| CDY42695 | Canola | endoplasmic reticulum, plasma membrane | 83.87 | 58.5 |
| CDY00731 | Canola | endoplasmic reticulum, plasma membrane | 64.16 | 58.5 |
| CDY08536 | Canola | endoplasmic reticulum, plasma membrane | 64.87 | 58.39 |
| CDX73882 | Canola | endoplasmic reticulum, plasma membrane | 63.8 | 58.17 |
| KRH66884 | Soybean | peroxisome | 72.4 | 58.05 |
| CDX98868 | Canola | endoplasmic reticulum, plasma membrane | 63.44 | 57.84 |
| KRG95205 | Soybean | peroxisome | 72.4 | 57.71 |
| CDX70125 | Canola | endoplasmic reticulum, plasma membrane | 63.08 | 57.52 |
| CDY11341 | Canola | plasma membrane | 62.37 | 56.86 |
| CDX80975 | Canola | endoplasmic reticulum, plasma membrane | 62.37 | 56.86 |
| CDY21054 | Canola | plastid | 50.9 | 39.34 |
| CDX98058 | Canola | plastid | 50.9 | 39.34 |
| CDY30085 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 50.9 | 39.34 |
| CDY58615 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 50.54 | 39.06 |
| CDY00919 | Canola | extracellular | 11.11 | 37.8 |
| CDX88379 | Canola | plasma membrane | 31.18 | 25.82 |
| CDX87511 | Canola | plasma membrane | 30.82 | 25.52 |
| CDX79213 | Canola | plasma membrane | 30.47 | 25.3 |
| CDX68051 | Canola | plasma membrane | 30.47 | 25.3 |
| CDY70208 | Canola | peroxisome, plasma membrane, plastid | 15.41 | 25.15 |
| CDY38193 | Canola | peroxisome, plasma membrane, plastid | 15.41 | 25.15 |
| CDY63382 | Canola | peroxisome, plasma membrane, plastid | 15.41 | 25.15 |
| CDY25067 | Canola | peroxisome, plasma membrane, plastid | 15.41 | 25.15 |
| CDX96572 | Canola | plasma membrane | 30.47 | 24.85 |
| CDY38825 | Canola | plasma membrane | 30.11 | 24.56 |
| CDY11527 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.47 | 24.36 |
| CDX76757 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.47 | 24.36 |
| CDY61664 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.11 | 24.0 |
| CDX78413 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.11 | 24.0 |
| CDX69775 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.75 | 23.71 |
| CDX70384 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.75 | 23.71 |
| CDX76991 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.03 | 23.48 |
| CDY35355 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.03 | 23.48 |
| CDX68840 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.39 | 23.36 |
| CDY05491 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.67 | 23.12 |
| CDX80508 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.67 | 23.12 |
| CDX88177 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.67 | 23.12 |
| CDX75240 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.03 | 23.08 |
| CDX98450 | Canola | plasma membrane | 26.16 | 21.6 |
| CDX97572 | Canola | plasma membrane | 26.16 | 21.04 |
| CDY39113 | Canola | plasma membrane | 25.81 | 20.0 |
| CDY33222 | Canola | golgi, peroxisome, plasma membrane | 25.45 | 19.72 |
| CDY43289 | Canola | plasma membrane | 25.09 | 19.23 |
| CDY41853 | Canola | plasma membrane | 25.09 | 18.97 |
| CDX79216 | Canola | endoplasmic reticulum, extracellular, vacuole | 12.9 | 18.85 |
| CDX93651 | Canola | plasma membrane | 24.73 | 18.7 |
| CDY63022 | Canola | plasma membrane | 24.73 | 18.55 |
| CDY48700 | Canola | plasma membrane | 24.73 | 18.55 |
| CDX77330 | Canola | plasma membrane | 24.37 | 18.43 |
| CDY66383 | Canola | plasma membrane | 16.13 | 17.18 |
| CDX92132 | Canola | plasma membrane | 17.92 | 16.13 |
| CDY41850 | Canola | plasma membrane | 15.77 | 15.77 |
| CDY06643 | Canola | golgi, peroxisome, plasma membrane | 20.43 | 15.12 |
| CDY10201 | Canola | golgi, peroxisome, plasma membrane | 21.15 | 14.22 |
| CDX86520 | Canola | golgi, peroxisome, plasma membrane | 20.43 | 13.73 |
| CDY15580 | Canola | plasma membrane | 20.43 | 13.73 |
| CDX79220 | Canola | mitochondrion | 17.2 | 9.9 |
| CDY41331 | Canola | cytosol, peroxisome, plasma membrane | 0.36 | 0.41 |
Protein Annotations
| EnsemblPlants:CDX80906 | EnsemblPlantsGene:GSBRNA2T00134311001 | GO:A0A078CUS1 | InterPro:Sugar_P_trans_dom | PANTHER:PTHR44010 | PANTHER:PTHR44010:SF2 |
| PFAM:PF03151 | ProteinID:CDX80906 | ProteinID:CDX80906.1 | TMHMM:TMhelix | UniParc:UPI0004EE4280 | MapMan:35.1 |
Description
BnaC03g01600D
Coordinates
chrLK031823:-:731001..732487
Molecular Weight (calculated)
30617.3 Da
IEP (calculated)
10.097
GRAVY (calculated)
0.700
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSSKKQT LFISTLIISW YSSNIGVLLL NKFLLSNYGF KFPIFLTMCH MSACAILSYV SIVFLKLVPL QHLKSRSQFL KVATLSIVFC ASVVGGNISL
101: RYLPLRSLGV VIASGGEPGF HWFGFIMCIS ATAARAFKSV LQGILLSSEG EKLNSMNLML YMSSIAVVAL LPVTLVMEPD VISLTLALAK QHQYMWILLL
201: VNSVMAYSAN LLNFLVTKHT SALTLQVLGN AKGAVAVVIS ILIFQNPVTV MEPGYGYGYW RVFHNGPWGG CLRRDKTQV
101: RYLPLRSLGV VIASGGEPGF HWFGFIMCIS ATAARAFKSV LQGILLSSEG EKLNSMNLML YMSSIAVVAL LPVTLVMEPD VISLTLALAK QHQYMWILLL
201: VNSVMAYSAN LLNFLVTKHT SALTLQVLGN AKGAVAVVIS ILIFQNPVTV MEPGYGYGYW RVFHNGPWGG CLRRDKTQV
001: MVEAQSWTTR RMSNPRFDAA ATAAPTIVDI PGTPPHSSAS SPLKPFFLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At1g12500 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDH3]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.