Factsheet for Solyc10g079910.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 3
mitochondrion 1
endoplasmic reticulum 4
golgi 4
extracellular 3
vacuole 3
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc08g076520.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G04160.1	Solyc08g076520.2.1	AT2G35470.1	21798944
AT5G04160.1	Solyc02g071920.2.1	AT4G19030.1	21798944
AT5G04160.1	Solyc03g005980.2.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076739	Potato	plasma membrane	98.06	98.06
Solyc04g016280.2.1	Tomato	endoplasmic reticulum, plasma membrane	89.03	89.03
Solyc10g079280.1.1	Tomato	endoplasmic reticulum, plasma membrane	88.71	88.71
CDX70255	Canola	endoplasmic reticulum, plasma membrane	79.35	79.1
CDY41396	Canola	endoplasmic reticulum, plasma membrane	79.35	79.1
AT5G04160.1	Thale cress	endoplasmic reticulum, plasma membrane	78.71	78.96
VIT_08s0007g08970.t01	Wine grape	plastid	80.65	78.86
Bra009481.1-P	Field mustard	endoplasmic reticulum, plasma membrane	79.03	78.78
CDY71741	Canola	endoplasmic reticulum, plasma membrane	69.68	75.26
Bra005796.1-P	Field mustard	endoplasmic reticulum, plasma membrane	67.42	74.64
CDX76352	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDY64269	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDY63119	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDY56711	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDY43207	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDY40726	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDY38198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDY32060	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDY30718	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDY19068	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDY16783	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDY06070	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDX88102	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	76.77	73.46
CDX80906	Canola	endoplasmic reticulum, plasma membrane	64.84	72.04
Solyc05g052790.2.1	Tomato	endoplasmic reticulum, plasma membrane	71.29	71.52
CDY00918	Canola	endoplasmic reticulum, extracellular, plasma membrane	27.42	71.43
KRH66884	Soybean	peroxisome	77.42	68.97
KRG95205	Soybean	peroxisome	76.77	68.0
AT3G10290.1	Thale cress	plastid	76.45	66.76
CDY53550	Canola	mitochondrion, plastid	76.77	59.8
CDY42695	Canola	endoplasmic reticulum, plasma membrane	76.77	59.5
Solyc08g079790.1.1	Tomato	golgi, mitochondrion, peroxisome, plastid	59.68	51.97
Bra034102.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	75.48	41.12
Solyc11g012880.1.1	Tomato	plasma membrane	32.58	29.97
Solyc06g060370.2.1	Tomato	plasma membrane	31.94	29.12
Solyc06g066070.1.1	Tomato	plasma membrane	28.06	25.59
Solyc12g006500.1.1	Tomato	plasma membrane	28.71	25.43
Solyc08g060940.1.1	Tomato	plasma membrane	28.71	25.36
Solyc10g007610.2.1	Tomato	plasma membrane	25.81	23.74
Solyc07g056530.2.1	Tomato	plasma membrane, vacuole	24.84	22.85
Solyc02g066910.2.1	Tomato	plasma membrane	27.1	22.28
Solyc02g088900.2.1	Tomato	plasma membrane	26.77	21.78
Solyc07g055700.2.1	Tomato	nucleus	22.9	14.61
Solyc12g010990.1.1	Tomato	cytosol	20.97	12.24

Protein Annotations

EnsemblPlants:Solyc10g079910.1.1	EnsemblPlantsGene:Solyc10g079910.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Sugar_P_trans_dom
PANTHER:PTHR44010	PANTHER:PTHR44010:SF2	PFAM:PF03151	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
UniParc:UPI000276AA20	UniProt:K4D2N2	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr10:+:61369257..61373491

Molecular Weight (calculated)

33583.0 Da

IEP (calculated)

10.020

GRAVY (calculated)

0.776

Length

310 amino acids

Sequence
(BLAST)

001: MLSGQLEKKG FFIATLITFW YSSNIGVLLL NKLLLSNYGF RFPIFLTMCH MTACAVLSYV SIVFLKIAPF QRIKSRSQFL RISTLSVVFC GSVVGGNISL
101: RYLPVSFNQA VGATTPFFTA LFAYLMTRKQ EAWATYGCLV PVVTGVVIAS GGEPSFHLYG FIMCIGATAA RAFKSVLQGV LLSSEGEKLN SMNLLLYMSP
201: IAVVVLLPAA LVMEPNVIDV TATLATEHRY LGLLIVVNSA MAYGANLLNF LVTKHTSALT LQVLGNAKGA VAVVISILIF QNPVTFIGIA GYTMTVMGVV
301: AYGESKRRHK

Best Arabidopsis Sequence Match ( AT5G04160.1 )
(BLAST)

001: MSSSAKKQTL FISTLIISWY SSNIGVLLLN KFLLSNYGFK FPIFLTMCHM SACAILSYIS IVFLKLVPLQ HLKSRSQFLK VATLSIVFCA SVVGGNISLR
101: YLPVSFNQAV GATTPFFTAL FAYLMTFKRE AWVTYGALVP VVAGVVIASG GEPGFHWFGF IMCISATAAR AFKSVLQGIL LSSEGEKLNS MNLMLYMSPI
201: AVIALLPVTL FMEPDVISVT LTLAKQHQYM WILLLVNSVM AYSANLLNFL VTKHTSALTL QVLGNAKGAV AVVISILIFQ NPVTVMGIGG YSITVLGVVA
301: YGETKRRFR

Arabidopsis Description

UUAT1UDP-URONIC ACID TRANSPORTER 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYE5]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.